Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA004357-TA|BGIBMGA004357-PA|undefined
(143 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0023 - 14232878-14233651,14235321-14235623 31 0.48
02_05_0484 - 29401195-29401404,29401572-29401755,29401866-294039... 29 1.5
10_05_0022 + 8157369-8157788 29 1.9
04_04_1306 + 32498967-32499872 29 1.9
02_02_0603 - 12057820-12058094,12058164-12058305,12058469-120585... 29 1.9
09_02_0501 - 9955987-9956244,9956329-9956583,9956713-9956884,995... 28 2.5
01_05_0715 - 24565473-24565727,24565816-24565881,24565968-245660... 28 2.5
01_05_0166 + 18844468-18845184,18847394-18847690 28 2.5
05_07_0093 - 27648656-27648736,27649034-27649147,27649229-276492... 28 3.4
08_02_1176 + 24931728-24931877,24933175-24933275,24934410-249347... 27 4.4
08_01_0148 + 1172975-1173340 27 4.4
01_03_0179 + 13500413-13500768,13502522-13502642,13502876-135029... 27 4.4
05_02_0043 + 5964749-5966406,5966725-5966791,5967174-5967329,596... 27 5.9
03_05_1070 + 30125131-30127029 27 5.9
12_01_0052 + 433203-433292,433409-433815,434435-434447,437081-43... 27 7.7
08_02_0520 - 18121561-18121821,18122216-18122470,18122560-181227... 27 7.7
01_01_1209 - 9738501-9738516,9738703-9739161,9739389-9739608,973... 27 7.7
01_01_0596 + 4435643-4436664,4437241-4437766 27 7.7
>10_08_0023 - 14232878-14233651,14235321-14235623
Length = 358
Score = 30.7 bits (66), Expect = 0.48
Identities = 23/94 (24%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Query: 13 WPLSPRLWRRSNEYTKVGFEPRRPPTSPLEIRRIFNMTPDLLRTRSFIKDRLDHLDLEEN 72
W + + R + + R+PP++ ++ ++T L ++ +D L ++N
Sbjct: 111 WEFANEGFLRGQRHLLKTIKRRKPPSNAPPSQQQ-SLTSCLEVGEFGFEEEIDRLKRDKN 169
Query: 73 ILEVEYEKLNLDSKPPIREKKVEEVRLRAKKQRQ 106
IL E KL + + K E RLRA +Q+Q
Sbjct: 170 ILITEVVKLRQEQQATKDHVKAMEDRLRAAEQKQ 203
>02_05_0484 -
29401195-29401404,29401572-29401755,29401866-29403973,
29404320-29404403,29404507-29404777,29404864-29405117,
29405513-29405722,29406357-29406503
Length = 1155
Score = 29.1 bits (62), Expect = 1.5
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 50 TPDLLRTRSFIKDRLDHLDLEENILEVEYEKLNLDSKPPIREKKVEEVRLRAKK 103
T DL + R ++ + LD + LE E +KLN + K R EE RL+ ++
Sbjct: 498 TEDLRKQRQKFEEEWEQLDEKRTHLEEEAKKLNNEKKNLERWHDNEEKRLKDRE 551
>10_05_0022 + 8157369-8157788
Length = 139
Score = 28.7 bits (61), Expect = 1.9
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 14 PLSPRLWRRSNEYTKVGFEPRRPPTSPLEIRRI-FNMTPDLLRTRSFIKDRLDHLDLEEN 72
PLSP WR S+ +G RR T ++ I +N+T + +T+ + + N
Sbjct: 56 PLSPSEWRSSSSRWDLGEITRRMDTFDMQTGEIQYNLTEHITQTQEWQQSANAQFANINN 115
Query: 73 ILEVEYEKL 81
+++ +++ L
Sbjct: 116 MMQQQHDDL 124
>04_04_1306 + 32498967-32499872
Length = 301
Score = 28.7 bits (61), Expect = 1.9
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 4 ESGQQNGRFWPLSPRLWRRSNEYTKVGFEPRRPPT 38
E QQ+G W L +W S KVG+ RR PT
Sbjct: 197 EREQQDG--WVLEESMWTMSCNGKKVGYAVRRDPT 229
>02_02_0603 -
12057820-12058094,12058164-12058305,12058469-12058515,
12058678-12058850,12059408-12059485,12059998-12060060,
12060135-12060207,12061989-12062377,12063225-12063304
Length = 439
Score = 28.7 bits (61), Expect = 1.9
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 47 FNMTPDLLRTRSFIKDRLDHLDLEENILEVEYEKLNLDSKPPIREKKVEEVRLRAKKQRQ 106
+N +L TRS R LD+ E I E ++ S PP+ +E RL KK+
Sbjct: 79 YNAPKNLTTTRSIFTCRAPALDVGEKI---ENGRIRRKSCPPVATIGTKEQRLDGKKKGL 135
Query: 107 P 107
P
Sbjct: 136 P 136
>09_02_0501 -
9955987-9956244,9956329-9956583,9956713-9956884,
9957000-9957227,9959102-9959235,9959319-9959402,
9959539-9959829,9960076-9960405,9960526-9960668,
9960970-9961126,9961210-9961313,9961423-9961583,
9961664-9961980,9962094-9962375,9962471-9962772,
9962848-9962938,9963262-9963338,9963428-9963587,
9963682-9963766,9963838-9963949,9964864-9964943,
9968644-9968981
Length = 1386
Score = 28.3 bits (60), Expect = 2.5
Identities = 12/44 (27%), Positives = 24/44 (54%)
Query: 43 IRRIFNMTPDLLRTRSFIKDRLDHLDLEENILEVEYEKLNLDSK 86
+ R+ + D K+RLD + ++ +EV YE LN++++
Sbjct: 90 LERVAGVADDHAGFLCMFKERLDRVGIKLPTIEVRYENLNVEAE 133
>01_05_0715 -
24565473-24565727,24565816-24565881,24565968-24566038,
24567259-24567351,24567434-24567497
Length = 182
Score = 28.3 bits (60), Expect = 2.5
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 21 RRSNEYTKVGFEPRRPPTSPLEIRRIFNMTPDLLRTRSFIKDRLDHLDLEENILEVEYE 79
RR + K G PPT PL ++ D L + ++L HLD++ E EY+
Sbjct: 28 RREQQQHKEGKRKAGPPTDPLPKSQVLGRVKDFLGEMAKANEKL-HLDVKNKRPE-EYD 84
>01_05_0166 + 18844468-18845184,18847394-18847690
Length = 337
Score = 28.3 bits (60), Expect = 2.5
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 4/91 (4%)
Query: 17 PRLWRRSNEYTKV-GFEPRRPPTSPLEIRRIFNMTPDLLRTRSFIKDRLDHLDLEENILE 75
P + R S K +P PPT P+E + P L+ +S + + D N E
Sbjct: 17 PSVLRNSRPAPKAPAAQPPPPPTLPIETTTSTSFQPALVAVQSTVMEEYD--PARPNDYE 74
Query: 76 VEYEKLNLDSKPPIREKKVEEVRLRAKKQRQ 106
+Y K L +K E R R +++R+
Sbjct: 75 -DYRKDKLKRAKEAEVRKELERRRREEEERE 104
>05_07_0093 -
27648656-27648736,27649034-27649147,27649229-27649288,
27649464-27649687,27649799-27649886,27650326-27650532,
27650566-27650784,27650903-27651001,27651439-27651504,
27651654-27651737,27651829-27651888,27652041-27652325,
27652789-27652836,27652988-27653034,27653442-27653556,
27653958-27654032,27654227-27654298,27654944-27656124,
27656613-27656757
Length = 1089
Score = 27.9 bits (59), Expect = 3.4
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 71 ENILEVEYEKLNLDSKPPIREKKVEEVR 98
E + E+E EK L+SK + E KVE ++
Sbjct: 544 EQVRELEEEKQRLNSKIQVEETKVESIK 571
Score = 26.6 bits (56), Expect = 7.7
Identities = 15/60 (25%), Positives = 30/60 (50%)
Query: 56 TRSFIKDRLDHLDLEENILEVEYEKLNLDSKPPIREKKVEEVRLRAKKQRQPRPNSLQLL 115
+RS K+R + + L ++ E + + E++++E+R R KK+ Q +LL
Sbjct: 771 SRSLEKERQRASESRQEYLAIKEEAAMQEGRAKQLEEEIKELRTRHKKELQDAAEHRELL 830
>08_02_1176 +
24931728-24931877,24933175-24933275,24934410-24934788,
24935509-24936354,24936555-24936642,24936947-24937039,
24937221-24937318,24937364-24937470,24938266-24938353,
24938748-24939005
Length = 735
Score = 27.5 bits (58), Expect = 4.4
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Query: 56 TRSFIKDRLDHLDLEENILEVEYEKLNLDSKPPIR------EKKVEEVRLRAKKQRQP 107
+R+FI DHL + ++ E+L +D+K E+K E++LR+K Q P
Sbjct: 78 SRAFISWLWDHLSVNLHLYVQTQEQLQVDNKDDEAPNELPGEQKSSELQLRSKDQTHP 135
>08_01_0148 + 1172975-1173340
Length = 121
Score = 27.5 bits (58), Expect = 4.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 14 PLSPRLWRRSNEYTKVGFEPRRPPTSPL 41
P +PRL R + T V F R PPT+ L
Sbjct: 15 PPTPRLLRANTRATFVSFPRRSPPTTSL 42
>01_03_0179 +
13500413-13500768,13502522-13502642,13502876-13502998,
13504409-13504497,13504612-13504696,13504852-13505011,
13505096-13505160,13505296-13505349,13505437-13505527,
13505685-13505986,13506084-13506365,13506451-13506764,
13506920-13507080,13507202-13507305,13507379-13507535,
13507652-13507896,13507995-13508327,13508428-13508751,
13508816-13508899,13509001-13509169,13509610-13509731,
13510538-13510792,13511115-13511252
Length = 1377
Score = 27.5 bits (58), Expect = 4.4
Identities = 9/27 (33%), Positives = 20/27 (74%)
Query: 60 IKDRLDHLDLEENILEVEYEKLNLDSK 86
+KDR+D + ++ +EV +EKL ++++
Sbjct: 113 LKDRMDRVGIDYPTIEVRFEKLEVEAE 139
>05_02_0043 +
5964749-5966406,5966725-5966791,5967174-5967329,
5967782-5967865,5968020-5968073
Length = 672
Score = 27.1 bits (57), Expect = 5.9
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 4/28 (14%)
Query: 8 QNGRFWPLSPRLWRRSNEYTKVGFEPRR 35
QNG F P WRR+++Y + G E RR
Sbjct: 359 QNGHF----PYRWRRASQYHEAGIEFRR 382
>03_05_1070 + 30125131-30127029
Length = 632
Score = 27.1 bits (57), Expect = 5.9
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 96 EVRLRAKKQRQPRPNSLQLLLCPSSSGHYSSSTWRYTRARSKRVM 140
+ RL + +QPRP ++ + G + WR T + +V+
Sbjct: 497 QTRLHLHRYQQPRPAAMAARHSADAGGGRGEAAWRSTATQDSQVL 541
>12_01_0052 +
433203-433292,433409-433815,434435-434447,437081-437473
Length = 300
Score = 26.6 bits (56), Expect = 7.7
Identities = 14/51 (27%), Positives = 21/51 (41%)
Query: 8 QNGRFWPLSPRLWRRSNEYTKVGFEPRRPPTSPLEIRRIFNMTPDLLRTRS 58
Q G W + W R+ Y + PR + P ++ + P LL T S
Sbjct: 118 QEGTLWWHAHSSWLRATVYGALLIRPRDGTSYPFHVQPTRELAPILLGTNS 168
>08_02_0520 -
18121561-18121821,18122216-18122470,18122560-18122731,
18122824-18123105,18123159-18123292,18123425-18123508,
18123611-18123901,18123982-18124314,18124620-18124750,
18124826-18124930,18125011-18125167,18125248-18125351,
18125442-18125602,18125800-18126116,18126369-18126650,
18127011-18127312,18127609-18127699,18127771-18127824,
18128110-18128186,18128279-18128438,18128545-18128629,
18129059-18129367,18129514-18129890
Length = 1507
Score = 26.6 bits (56), Expect = 7.7
Identities = 10/26 (38%), Positives = 18/26 (69%)
Query: 60 IKDRLDHLDLEENILEVEYEKLNLDS 85
+K R+D + L+ +EV YE L++D+
Sbjct: 120 LKQRIDRVGLDFPTIEVRYEHLSIDA 145
>01_01_1209 -
9738501-9738516,9738703-9739161,9739389-9739608,
9739708-9739831,9739927-9740635,9741826-9742132,
9742213-9743704
Length = 1108
Score = 26.6 bits (56), Expect = 7.7
Identities = 11/39 (28%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 95 EEVRLRAKKQRQPRPNSLQLLLCPSSSGHYSSSTWRYTR 133
E++R R + RQ ++LL P ++G ++ W++ R
Sbjct: 159 EDLR-RHRSDRQENNRLARVLLAPPAAGEFAPKKWKHIR 196
>01_01_0596 + 4435643-4436664,4437241-4437766
Length = 515
Score = 26.6 bits (56), Expect = 7.7
Identities = 11/21 (52%), Positives = 14/21 (66%)
Query: 79 EKLNLDSKPPIREKKVEEVRL 99
E L LD+ PP RE ++ VRL
Sbjct: 432 EALRLDASPPARETELRRVRL 452
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,691,382
Number of Sequences: 37544
Number of extensions: 195443
Number of successful extensions: 593
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 580
Number of HSP's gapped (non-prelim): 20
length of query: 143
length of database: 14,793,348
effective HSP length: 75
effective length of query: 68
effective length of database: 11,977,548
effective search space: 814473264
effective search space used: 814473264
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 56 (26.6 bits)
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