Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA004357-TA|BGIBMGA004357-PA|undefined
(143 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39993-3|AAK72060.1| 728|Caenorhabditis elegans Hypothetical pr... 32 0.14
U41010-3|AAF98587.1| 655|Caenorhabditis elegans Hypothetical pr... 29 0.96
U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical pr... 29 1.7
U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical pr... 29 1.7
AL117204-9|CAB55124.1| 358|Caenorhabditis elegans Hypothetical ... 29 1.7
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Hypothetical ... 29 1.7
Z68297-2|CAA92594.3| 522|Caenorhabditis elegans Hypothetical pr... 28 2.2
AF088288-1|AAC98295.1| 826|Caenorhabditis elegans caspase-relat... 28 2.2
AC084197-7|AAM44398.1| 826|Caenorhabditis elegans Caspase prote... 28 2.2
AL132948-16|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical... 28 2.9
AL117203-14|CAB60423.1| 487|Caenorhabditis elegans Hypothetical... 28 2.9
AF039040-5|AAB94181.2| 472|Caenorhabditis elegans Hypothetical ... 28 2.9
Z81057-1|CAB02914.2| 460|Caenorhabditis elegans Hypothetical pr... 27 3.9
Z75531-10|CAJ85759.1| 500|Caenorhabditis elegans Hypothetical p... 27 3.9
Z36753-17|CAA85342.1| 821|Caenorhabditis elegans Hypothetical p... 27 3.9
AF240692-1|AAF61239.1| 821|Caenorhabditis elegans LIN-5 protein. 27 3.9
Z73906-12|CAE17767.1| 170|Caenorhabditis elegans Hypothetical p... 27 5.1
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 27 6.8
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 27 6.8
Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical pr... 27 6.8
Z92788-8|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 27 6.8
Z92788-7|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 27 6.8
Z92788-5|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical pr... 27 6.8
Z34802-3|CAA84333.1| 354|Caenorhabditis elegans Hypothetical pr... 27 6.8
U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction... 27 6.8
U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction... 27 6.8
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction... 27 6.8
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 27 6.8
U23147-2|AAC46688.1| 918|Caenorhabditis elegans Hypothetical pr... 27 6.8
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 27 6.8
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 27 6.8
AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical ... 27 6.8
AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B prote... 27 6.8
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 27 6.8
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 27 6.8
Z50029-6|CAD57714.1| 1072|Caenorhabditis elegans Hypothetical pr... 26 9.0
Z50029-5|CAC42384.1| 1096|Caenorhabditis elegans Hypothetical pr... 26 9.0
Z50029-4|CAB63417.1| 1082|Caenorhabditis elegans Hypothetical pr... 26 9.0
Z50029-3|CAB63416.1| 1087|Caenorhabditis elegans Hypothetical pr... 26 9.0
AL132948-27|CAD31825.1| 1434|Caenorhabditis elegans Hypothetical... 26 9.0
AF087133-1|AAD14595.1| 728|Caenorhabditis elegans alternatively... 26 9.0
AF087132-1|AAD14594.1| 792|Caenorhabditis elegans alternatively... 26 9.0
AF087131-1|AAD14593.1| 1087|Caenorhabditis elegans alternatively... 26 9.0
>U39993-3|AAK72060.1| 728|Caenorhabditis elegans Hypothetical
protein F47E1.4 protein.
Length = 728
Score = 32.3 bits (70), Expect = 0.14
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 31 FEPRRPPTSPLEIRRIFNMTPDLLRTRSFIKDRLDHLDLEENILEVEYE-KLNL-DSKPP 88
F R+ T+ L I TP L S +KD L + +E+ + Y+ LNL D K P
Sbjct: 95 FPTRQQKTNGLNISESLRPTPSQLLPNSTLKDLLSYPLMEDQLPSSTYQFLLNLTDDKTP 154
Query: 89 IREKKVE 95
I + + E
Sbjct: 155 IEQTQTE 161
>U41010-3|AAF98587.1| 655|Caenorhabditis elegans Hypothetical
protein T05A12.3 protein.
Length = 655
Score = 29.5 bits (63), Expect = 0.96
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 79 EKLNLDSKPPIREKKVEEVRLRAKKQRQPRP--NSLQLLLCPSSSGHYSSST 128
EK L K R+++VE++R++ K++ + R +S Q PSSS H + ST
Sbjct: 315 EKEKLKEKQE-RQREVEKLRIKEKEREKARAASSSSQKSSKPSSSSHNNGST 365
>U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical
protein B0496.3a protein.
Length = 1551
Score = 28.7 bits (61), Expect = 1.7
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Query: 14 PLSPRLWRRSNEYTKVG--FEPRRPPTSPLEIRRIFNMTPDLLRTRSFIKDRLDH--LDL 69
P R + R K G FEP P T+ + IR + + P+ R+ I D H L+L
Sbjct: 272 PFDGRDFNRMVRQIKRGAYFEPETPSTASMLIRNMLRVNPE---RRATIFDIASHWWLNL 328
Query: 70 EENILEV-EYEKLNLDSKPPIREKK 93
EEN+ + E + + P+ E++
Sbjct: 329 EENMPVIQELPENQIIDHTPLTERE 353
>U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical
protein B0496.3b protein.
Length = 1592
Score = 28.7 bits (61), Expect = 1.7
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Query: 14 PLSPRLWRRSNEYTKVG--FEPRRPPTSPLEIRRIFNMTPDLLRTRSFIKDRLDH--LDL 69
P R + R K G FEP P T+ + IR + + P+ R+ I D H L+L
Sbjct: 272 PFDGRDFNRMVRQIKRGAYFEPETPSTASMLIRNMLRVNPE---RRATIFDIASHWWLNL 328
Query: 70 EENILEV-EYEKLNLDSKPPIREKK 93
EEN+ + E + + P+ E++
Sbjct: 329 EENMPVIQELPENQIIDHTPLTERE 353
>AL117204-9|CAB55124.1| 358|Caenorhabditis elegans Hypothetical
protein Y116A8C.18 protein.
Length = 358
Score = 28.7 bits (61), Expect = 1.7
Identities = 13/43 (30%), Positives = 25/43 (58%)
Query: 61 KDRLDHLDLEENILEVEYEKLNLDSKPPIREKKVEEVRLRAKK 103
+++L L + +E EK+ + K I K+VEE+++R K+
Sbjct: 94 EEKLSKKHLLTTMKSLETEKMEQEHKTKIMNKEVEELKIRVKE 136
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Hypothetical
protein Y67D8C.5 protein.
Length = 4177
Score = 28.7 bits (61), Expect = 1.7
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 60 IKDRLDHLDLEENILEVEYEKLNLDSKPPIREK-----KVEEVRLRAKKQRQPRPNSLQL 114
+K+ L + + L V+ KL LD + RE+ K +E + +K +
Sbjct: 2173 VKNALASYSEKASELRVDLAKLQLDKESEEREEATTSLKKQETEVLSKISELCSIIIIMC 2232
Query: 115 LLCPSSSGHYSSSTWRYTRARSKR 138
CP+ H+ SST R R RS +
Sbjct: 2233 QSCPAHHHHHHSSTDRNNRERSSQ 2256
>Z68297-2|CAA92594.3| 522|Caenorhabditis elegans Hypothetical
protein F11A10.3 protein.
Length = 522
Score = 28.3 bits (60), Expect = 2.2
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 9/85 (10%)
Query: 33 PRRPPTSPLEI--RRIFNMTP--DLL--RTRSFIKDRLDHLDLEENILEVEYEKLNLD-- 84
P PPTSP R + T D+ + R + + + + +E+ V+ NL
Sbjct: 134 PETPPTSPSPSPSRSVSPSTTKSDISSKKGRKAVVNSVSKVKIEKESTPVKTNGRNLPPK 193
Query: 85 -SKPPIREKKVEEVRLRAKKQRQPR 108
K P+ E+ EE++LR + +R+ R
Sbjct: 194 RKKKPVEEETAEEIKLRERAERKAR 218
>AF088288-1|AAC98295.1| 826|Caenorhabditis elegans caspase-related
protein 2A protein.
Length = 826
Score = 28.3 bits (60), Expect = 2.2
Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 8/105 (7%)
Query: 36 PPTSPLEIRRIFNMTPDLLRTRSFIKDRLDHLDLEENILEVEYEKLNLDSKPPIREKKVE 95
P + + + N+ L R IK+RLD +D + E + L + +RE + +
Sbjct: 122 PESIDAATKNVQNVKQSLDTWRDRIKERLDEID---RLCTEEGDSLTPEQYSALREMRRQ 178
Query: 96 -----EVRLRAKKQRQPRPNSLQLLLCPSSSGHYSSSTWRYTRAR 135
+ LR + R N L LL SS S +W RAR
Sbjct: 179 LADEYDTVLRTVEGIHTRLNILSALLIEFSSVTSSMQSWMTDRAR 223
>AC084197-7|AAM44398.1| 826|Caenorhabditis elegans Caspase protein
2 protein.
Length = 826
Score = 28.3 bits (60), Expect = 2.2
Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 8/105 (7%)
Query: 36 PPTSPLEIRRIFNMTPDLLRTRSFIKDRLDHLDLEENILEVEYEKLNLDSKPPIREKKVE 95
P + + + N+ L R IK+RLD +D + E + L + +RE + +
Sbjct: 122 PESIDAATKNVQNVKQSLDTWRDRIKERLDEID---RLCTEEGDSLTPEQYSALREMRRQ 178
Query: 96 -----EVRLRAKKQRQPRPNSLQLLLCPSSSGHYSSSTWRYTRAR 135
+ LR + R N L LL SS S +W RAR
Sbjct: 179 LADEYDTVLRTVEGIHTRLNILSALLIEFSSVTSSMQSWMTDRAR 223
>AL132948-16|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical
protein Y39B6A.18 protein.
Length = 1352
Score = 27.9 bits (59), Expect = 2.9
Identities = 13/46 (28%), Positives = 27/46 (58%)
Query: 60 IKDRLDHLDLEENILEVEYEKLNLDSKPPIREKKVEEVRLRAKKQR 105
+K + + EE L+ E EK+ ++ + + K EE RL+A++++
Sbjct: 891 VKAEREKVKKEEERLKAEEEKVKVEKERNKEKVKAEEERLKAEEEK 936
>AL117203-14|CAB60423.1| 487|Caenorhabditis elegans Hypothetical
protein Y48C3A.20 protein.
Length = 487
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/40 (35%), Positives = 25/40 (62%)
Query: 52 DLLRTRSFIKDRLDHLDLEENILEVEYEKLNLDSKPPIRE 91
D RTR + + LD E +ILE++ EK++L+ P +++
Sbjct: 422 DFGRTRPSLAELLDVEHGEVDILELDVEKVDLEWPPELKD 461
>AF039040-5|AAB94181.2| 472|Caenorhabditis elegans Hypothetical
protein T22B11.1 protein.
Length = 472
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/53 (26%), Positives = 30/53 (56%)
Query: 39 SPLEIRRIFNMTPDLLRTRSFIKDRLDHLDLEENILEVEYEKLNLDSKPPIRE 91
+P + R+ + D+ T++FI++ D +D ++ I + E+ N+DS +E
Sbjct: 116 NPSQFARVSEIWQDVQNTKNFIENLDDDVDPDDVIWYPKTEEDNVDSNRTAKE 168
>Z81057-1|CAB02914.2| 460|Caenorhabditis elegans Hypothetical
protein F10D11.2 protein.
Length = 460
Score = 27.5 bits (58), Expect = 3.9
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Query: 54 LRTRSFIKDRLDHLDLEENILEVEYEKLNLDSKPPIREKKVEEVRLRAKKQRQPRPNSLQ 113
+ R F+K+ + +E ILE E E+ ++ +R K VR R KK ++
Sbjct: 209 MSVRDFLKNTMTVQKADEKILEEELERERDEAAQTVRYNKF-RVRNRPKKYKRSAVTFTS 267
Query: 114 LLLCPSSSGHYSSST 128
L +SS SSST
Sbjct: 268 SLEAATSS---SSST 279
>Z75531-10|CAJ85759.1| 500|Caenorhabditis elegans Hypothetical
protein C54D10.12 protein.
Length = 500
Score = 27.5 bits (58), Expect = 3.9
Identities = 14/53 (26%), Positives = 34/53 (64%), Gaps = 6/53 (11%)
Query: 59 FIKDRLDHLDLEENILEVEYEKLNLDSKPPI-----REKKVEEVRLRAKKQRQ 106
FI+++ H ++EEN ++E+E+ + + + +E+K++E+ LR K++ +
Sbjct: 182 FIENQRQH-EIEENERKMEFERKQAEHEEKLQQIREKERKLQELLLRQKEEAE 233
>Z36753-17|CAA85342.1| 821|Caenorhabditis elegans Hypothetical
protein T09A5.10 protein.
Length = 821
Score = 27.5 bits (58), Expect = 3.9
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 42 EIRRIFNMTPDLLRTRSFIKDRLDHLDLEENILEVEYEKLNLDSKPPIREKKVEEVRLRA 101
E R +L T +D++ DL+E + VE + +L S+ VEE+ + +
Sbjct: 348 EFARFRQQEQELTETLRATQDQM--ADLQEQLTGVEKIRASLKSENESLSASVEELSVAS 405
Query: 102 KKQRQPRPNSLQLL 115
+ +Q NS +L
Sbjct: 406 LRNKQDADNSKTML 419
>AF240692-1|AAF61239.1| 821|Caenorhabditis elegans LIN-5 protein.
Length = 821
Score = 27.5 bits (58), Expect = 3.9
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 42 EIRRIFNMTPDLLRTRSFIKDRLDHLDLEENILEVEYEKLNLDSKPPIREKKVEEVRLRA 101
E R +L T +D++ DL+E + VE + +L S+ VEE+ + +
Sbjct: 348 EFARFRQQEQELTETLRATQDQM--ADLQEQLTGVEKIRASLKSENESLSASVEELSVAS 405
Query: 102 KKQRQPRPNSLQLL 115
+ +Q NS +L
Sbjct: 406 LRNKQDADNSKTML 419
>Z73906-12|CAE17767.1| 170|Caenorhabditis elegans Hypothetical
protein D2030.12 protein.
Length = 170
Score = 27.1 bits (57), Expect = 5.1
Identities = 10/34 (29%), Positives = 21/34 (61%)
Query: 108 RPNSLQLLLCPSSSGHYSSSTWRYTRARSKRVMD 141
+P+ +LL P+ G Y S+ YT ++++++D
Sbjct: 93 KPSPQVILLMPTEDGKYRKSSKVYTDEQTRQILD 126
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 26.6 bits (56), Expect = 6.8
Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 8/105 (7%)
Query: 36 PPTSPLEIRRIFNMTPDLLRTRSFIKDRLDHLDLEENILEVEYEKLNLDSKPPIREKKVE 95
P + + + N+ L R IK+RLD +D + E + L + +RE + +
Sbjct: 1403 PESIDAATKNVQNVKQSLDSWRDRIKERLDEID---RLCTEEGDSLTPEQYSALREMRRQ 1459
Query: 96 -----EVRLRAKKQRQPRPNSLQLLLCPSSSGHYSSSTWRYTRAR 135
+ LR + R N L LL SS S +W R R
Sbjct: 1460 LADEYDTVLRTVEGIHTRLNILSALLIEFSSVTSSMQSWMTDRTR 1504
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 26.6 bits (56), Expect = 6.8
Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 8/105 (7%)
Query: 36 PPTSPLEIRRIFNMTPDLLRTRSFIKDRLDHLDLEENILEVEYEKLNLDSKPPIREKKVE 95
P + + + N+ L R IK+RLD +D + E + L + +RE + +
Sbjct: 1403 PESIDAATKNVQNVKQSLDSWRDRIKERLDEID---RLCTEEGDSLTPEQYSALREMRRQ 1459
Query: 96 -----EVRLRAKKQRQPRPNSLQLLLCPSSSGHYSSSTWRYTRAR 135
+ LR + R N L LL SS S +W R R
Sbjct: 1460 LADEYDTVLRTVEGIHTRLNILSALLIEFSSVTSSMQSWMTDRTR 1504
>Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 26.6 bits (56), Expect = 6.8
Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 8/105 (7%)
Query: 36 PPTSPLEIRRIFNMTPDLLRTRSFIKDRLDHLDLEENILEVEYEKLNLDSKPPIREKKVE 95
P + + + N+ L R IK+RLD +D + E + L + +RE + +
Sbjct: 1403 PESIDAATKNVQNVKQSLDSWRDRIKERLDEID---RLCTEEGDSLTPEQYSALREMRRQ 1459
Query: 96 -----EVRLRAKKQRQPRPNSLQLLLCPSSSGHYSSSTWRYTRAR 135
+ LR + R N L LL SS S +W R R
Sbjct: 1460 LADEYDTVLRTVEGIHTRLNILSALLIEFSSVTSSMQSWMTDRTR 1504
>Z92788-8|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 26.6 bits (56), Expect = 6.8
Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 8/105 (7%)
Query: 36 PPTSPLEIRRIFNMTPDLLRTRSFIKDRLDHLDLEENILEVEYEKLNLDSKPPIREKKVE 95
P + + + N+ L R IK+RLD +D + E + L + +RE + +
Sbjct: 1403 PESIDAATKNVQNVKQSLDSWRDRIKERLDEID---RLCTEEGDSLTPEQYSALREMRRQ 1459
Query: 96 -----EVRLRAKKQRQPRPNSLQLLLCPSSSGHYSSSTWRYTRAR 135
+ LR + R N L LL SS S +W R R
Sbjct: 1460 LADEYDTVLRTVEGIHTRLNILSALLIEFSSVTSSMQSWMTDRTR 1504
>Z92788-7|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 26.6 bits (56), Expect = 6.8
Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 8/105 (7%)
Query: 36 PPTSPLEIRRIFNMTPDLLRTRSFIKDRLDHLDLEENILEVEYEKLNLDSKPPIREKKVE 95
P + + + N+ L R IK+RLD +D + E + L + +RE + +
Sbjct: 1403 PESIDAATKNVQNVKQSLDSWRDRIKERLDEID---RLCTEEGDSLTPEQYSALREMRRQ 1459
Query: 96 -----EVRLRAKKQRQPRPNSLQLLLCPSSSGHYSSSTWRYTRAR 135
+ LR + R N L LL SS S +W R R
Sbjct: 1460 LADEYDTVLRTVEGIHTRLNILSALLIEFSSVTSSMQSWMTDRTR 1504
>Z92788-5|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 26.6 bits (56), Expect = 6.8
Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 8/105 (7%)
Query: 36 PPTSPLEIRRIFNMTPDLLRTRSFIKDRLDHLDLEENILEVEYEKLNLDSKPPIREKKVE 95
P + + + N+ L R IK+RLD +D + E + L + +RE + +
Sbjct: 1403 PESIDAATKNVQNVKQSLDSWRDRIKERLDEID---RLCTEEGDSLTPEQYSALREMRRQ 1459
Query: 96 -----EVRLRAKKQRQPRPNSLQLLLCPSSSGHYSSSTWRYTRAR 135
+ LR + R N L LL SS S +W R R
Sbjct: 1460 LADEYDTVLRTVEGIHTRLNILSALLIEFSSVTSSMQSWMTDRTR 1504
>Z34802-3|CAA84333.1| 354|Caenorhabditis elegans Hypothetical
protein M88.3 protein.
Length = 354
Score = 26.6 bits (56), Expect = 6.8
Identities = 8/38 (21%), Positives = 25/38 (65%)
Query: 42 EIRRIFNMTPDLLRTRSFIKDRLDHLDLEENILEVEYE 79
+ R I+ + +++ + ++ ++LD L ++ N++E+E +
Sbjct: 234 DFRLIYPLLQEMIGVKLYVLEQLDILGVQHNVVELEVQ 271
>U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction
molecule protein1, isoform b protein.
Length = 944
Score = 26.6 bits (56), Expect = 6.8
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 18 RLWRRSNEYTKVGFEPRRPPTSPLEIRRIFNMTPDLLRTRSFIKDRLDHLDLEENILEVE 77
RL ++ + ++ E RR E RR F + + R + +DR D LD E+E
Sbjct: 544 RLEQQKIDMERIDAE-RRERERKEEERREFELI-EAARRKKEARDR-DRLD------EME 594
Query: 78 YEKLNLDSKPPIREKKVEEVRLRAKKQRQPR 108
E++ + + +E++ +E R+ A+K+R+ R
Sbjct: 595 RERVREEEERREKERREQERRIAAEKERKRR 625
>U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction
molecule protein1, isoform c protein.
Length = 1148
Score = 26.6 bits (56), Expect = 6.8
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 18 RLWRRSNEYTKVGFEPRRPPTSPLEIRRIFNMTPDLLRTRSFIKDRLDHLDLEENILEVE 77
RL ++ + ++ E RR E RR F + + R + +DR D LD E+E
Sbjct: 544 RLEQQKIDMERIDAE-RRERERKEEERREFELI-EAARRKKEARDR-DRLD------EME 594
Query: 78 YEKLNLDSKPPIREKKVEEVRLRAKKQRQPR 108
E++ + + +E++ +E R+ A+K+R+ R
Sbjct: 595 RERVREEEERREKERREQERRIAAEKERKRR 625
>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
molecule protein1, isoform d protein.
Length = 1439
Score = 26.6 bits (56), Expect = 6.8
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 18 RLWRRSNEYTKVGFEPRRPPTSPLEIRRIFNMTPDLLRTRSFIKDRLDHLDLEENILEVE 77
RL ++ + ++ E RR E RR F + + R + +DR D LD E+E
Sbjct: 544 RLEQQKIDMERIDAE-RRERERKEEERREFELI-EAARRKKEARDR-DRLD------EME 594
Query: 78 YEKLNLDSKPPIREKKVEEVRLRAKKQRQPR 108
E++ + + +E++ +E R+ A+K+R+ R
Sbjct: 595 RERVREEEERREKERREQERRIAAEKERKRR 625
>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
molecule protein1, isoform a protein.
Length = 1480
Score = 26.6 bits (56), Expect = 6.8
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 18 RLWRRSNEYTKVGFEPRRPPTSPLEIRRIFNMTPDLLRTRSFIKDRLDHLDLEENILEVE 77
RL ++ + ++ E RR E RR F + + R + +DR D LD E+E
Sbjct: 544 RLEQQKIDMERIDAE-RRERERKEEERREFELI-EAARRKKEARDR-DRLD------EME 594
Query: 78 YEKLNLDSKPPIREKKVEEVRLRAKKQRQPR 108
E++ + + +E++ +E R+ A+K+R+ R
Sbjct: 595 RERVREEEERREKERREQERRIAAEKERKRR 625
>U23147-2|AAC46688.1| 918|Caenorhabditis elegans Hypothetical
protein C18H9.3 protein.
Length = 918
Score = 26.6 bits (56), Expect = 6.8
Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 47 FNMTPDLLRTRSFIKDRLDHLDLEENILEVEYEKLNLDSKPPIREKKVEEVRLRAKKQRQ 106
+N + + K+ D + LEE E E+ L+++ + E+K+ R+RA+ + +
Sbjct: 593 YNRMCEKKKNEIIAKEAADRMRLEE---ATERERRRLEAESRVAEEKIRRDRVRAELEAR 649
Query: 107 PR 108
R
Sbjct: 650 ER 651
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 26.6 bits (56), Expect = 6.8
Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 8/105 (7%)
Query: 36 PPTSPLEIRRIFNMTPDLLRTRSFIKDRLDHLDLEENILEVEYEKLNLDSKPPIREKKVE 95
P + + + N+ L R IK+RLD +D + E + L + +RE + +
Sbjct: 1403 PESIDAATKNVQNVKQSLDSWRDRIKERLDEID---RLCTEEGDSLTPEQYSALREMRRQ 1459
Query: 96 -----EVRLRAKKQRQPRPNSLQLLLCPSSSGHYSSSTWRYTRAR 135
+ LR + R N L LL SS S +W R R
Sbjct: 1460 LADEYDTVLRTVEGIHTRLNILSALLIEFSSVTSSMQSWMTDRTR 1504
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 26.6 bits (56), Expect = 6.8
Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 8/105 (7%)
Query: 36 PPTSPLEIRRIFNMTPDLLRTRSFIKDRLDHLDLEENILEVEYEKLNLDSKPPIREKKVE 95
P + + + N+ L R IK+RLD +D + E + L + +RE + +
Sbjct: 1403 PESIDAATKNVQNVKQSLDSWRDRIKERLDEID---RLCTEEGDSLTPEQYSALREMRRQ 1459
Query: 96 -----EVRLRAKKQRQPRPNSLQLLLCPSSSGHYSSSTWRYTRAR 135
+ LR + R N L LL SS S +W R R
Sbjct: 1460 LADEYDTVLRTVEGIHTRLNILSALLIEFSSVTSSMQSWMTDRTR 1504
>AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 26.6 bits (56), Expect = 6.8
Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 8/105 (7%)
Query: 36 PPTSPLEIRRIFNMTPDLLRTRSFIKDRLDHLDLEENILEVEYEKLNLDSKPPIREKKVE 95
P + + + N+ L R IK+RLD +D + E + L + +RE + +
Sbjct: 1403 PESIDAATKNVQNVKQSLDSWRDRIKERLDEID---RLCTEEGDSLTPEQYSALREMRRQ 1459
Query: 96 -----EVRLRAKKQRQPRPNSLQLLLCPSSSGHYSSSTWRYTRAR 135
+ LR + R N L LL SS S +W R R
Sbjct: 1460 LADEYDTVLRTVEGIHTRLNILSALLIEFSSVTSSMQSWMTDRTR 1504
>AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B protein
protein.
Length = 3522
Score = 26.6 bits (56), Expect = 6.8
Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 8/105 (7%)
Query: 36 PPTSPLEIRRIFNMTPDLLRTRSFIKDRLDHLDLEENILEVEYEKLNLDSKPPIREKKVE 95
P + + + N+ L R IK+RLD +D + E + L + +RE + +
Sbjct: 1403 PESIDAATKNVQNVKQSLDSWRDRIKERLDEID---RLCTEEGDSLTPEQYSALREMRRQ 1459
Query: 96 -----EVRLRAKKQRQPRPNSLQLLLCPSSSGHYSSSTWRYTRAR 135
+ LR + R N L LL SS S +W R R
Sbjct: 1460 LADEYDTVLRTVEGIHTRLNILSALLIEFSSVTSSMQSWMTDRTR 1504
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 26.6 bits (56), Expect = 6.8
Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 8/105 (7%)
Query: 36 PPTSPLEIRRIFNMTPDLLRTRSFIKDRLDHLDLEENILEVEYEKLNLDSKPPIREKKVE 95
P + + + N+ L R IK+RLD +D + E + L + +RE + +
Sbjct: 1403 PESIDAATKNVQNVKQSLDSWRDRIKERLDEID---RLCTEEGDSLTPEQYSALREMRRQ 1459
Query: 96 -----EVRLRAKKQRQPRPNSLQLLLCPSSSGHYSSSTWRYTRAR 135
+ LR + R N L LL SS S +W R R
Sbjct: 1460 LADEYDTVLRTVEGIHTRLNILSALLIEFSSVTSSMQSWMTDRTR 1504
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 26.6 bits (56), Expect = 6.8
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 89 IREKKVEEVRLRAKKQRQPRPNSLQLLLCPSSS 121
+ +K V V + AK+ + R N + LLL P+SS
Sbjct: 13 LEQKDVRTVFVSAKEDNEERENRVVLLLGPTSS 45
>Z50029-6|CAD57714.1| 1072|Caenorhabditis elegans Hypothetical
protein ZC504.4d protein.
Length = 1072
Score = 26.2 bits (55), Expect = 9.0
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 107 PRPNSLQLLLCPSSSGHYSSSTWRYTR 133
P N +QLLLC + G Y ++ R T+
Sbjct: 959 PNSNGMQLLLCYDNEGVYVNTYGRMTK 985
>Z50029-5|CAC42384.1| 1096|Caenorhabditis elegans Hypothetical protein
ZC504.4c protein.
Length = 1096
Score = 26.2 bits (55), Expect = 9.0
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 107 PRPNSLQLLLCPSSSGHYSSSTWRYTR 133
P N +QLLLC + G Y ++ R T+
Sbjct: 983 PNSNGMQLLLCYDNEGVYVNTYGRMTK 1009
>Z50029-4|CAB63417.1| 1082|Caenorhabditis elegans Hypothetical
protein ZC504.4b protein.
Length = 1082
Score = 26.2 bits (55), Expect = 9.0
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 107 PRPNSLQLLLCPSSSGHYSSSTWRYTR 133
P N +QLLLC + G Y ++ R T+
Sbjct: 969 PNSNGMQLLLCYDNEGVYVNTYGRMTK 995
>Z50029-3|CAB63416.1| 1087|Caenorhabditis elegans Hypothetical protein
ZC504.4a protein.
Length = 1087
Score = 26.2 bits (55), Expect = 9.0
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 107 PRPNSLQLLLCPSSSGHYSSSTWRYTR 133
P N +QLLLC + G Y ++ R T+
Sbjct: 974 PNSNGMQLLLCYDNEGVYVNTYGRMTK 1000
>AL132948-27|CAD31825.1| 1434|Caenorhabditis elegans Hypothetical
protein Y39B6A.30 protein.
Length = 1434
Score = 26.2 bits (55), Expect = 9.0
Identities = 13/49 (26%), Positives = 28/49 (57%)
Query: 57 RSFIKDRLDHLDLEENILEVEYEKLNLDSKPPIREKKVEEVRLRAKKQR 105
R +K + L EE ++VE EK+ + + EK+ + +++A+++R
Sbjct: 946 REKVKKEEERLKAEEEKVKVEKEKVKAEEEKVKVEKERNKEKVKAEEER 994
>AF087133-1|AAD14595.1| 728|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 728
Score = 26.2 bits (55), Expect = 9.0
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 107 PRPNSLQLLLCPSSSGHYSSSTWRYTR 133
P N +QLLLC + G Y ++ R T+
Sbjct: 615 PNSNGMQLLLCYDNEGVYVNTYGRMTK 641
>AF087132-1|AAD14594.1| 792|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 792
Score = 26.2 bits (55), Expect = 9.0
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 107 PRPNSLQLLLCPSSSGHYSSSTWRYTR 133
P N +QLLLC + G Y ++ R T+
Sbjct: 679 PNSNGMQLLLCYDNEGVYVNTYGRMTK 705
>AF087131-1|AAD14593.1| 1087|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 1087
Score = 26.2 bits (55), Expect = 9.0
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 107 PRPNSLQLLLCPSSSGHYSSSTWRYTR 133
P N +QLLLC + G Y ++ R T+
Sbjct: 974 PNSNGMQLLLCYDNEGVYVNTYGRMTK 1000
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.318 0.134 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,931,260
Number of Sequences: 27539
Number of extensions: 171027
Number of successful extensions: 631
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 611
Number of HSP's gapped (non-prelim): 46
length of query: 143
length of database: 12,573,161
effective HSP length: 75
effective length of query: 68
effective length of database: 10,507,736
effective search space: 714526048
effective search space used: 714526048
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 55 (26.2 bits)
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