GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004344-TA|BGIBMGA004344-PA|IPR011025|G protein alpha
subunit, helical insertion, IPR001019|Guanine nucleotide binding
protein (G-protein), alpha subunit
         (380 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              25   0.81 
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              25   1.1  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    23   5.7  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    23   5.7  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   5.7  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           23   5.7  

>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 25.4 bits (53), Expect = 0.81
 Identities = 8/21 (38%), Positives = 15/21 (71%)

Query: 350 TCAVDTENIKRVFNDCRDIIQ 370
           T  +D+E + R+ N+C+DI +
Sbjct: 88  TTKLDSEQVNRLVNNCKDITE 108


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 3/55 (5%)

Query: 139 LWKDQGVQRTYGRSNEYQLIDCAKYFLDKVHIIKQADYT---PTEQDILRCRVLT 190
           +W+  G         E ++ +    +L KV +I   +YT      QD+++  VLT
Sbjct: 343 VWRRNGADLETLNEPEIRVFNDGSLYLTKVQLIHAGNYTCHAVRNQDVVQTHVLT 397


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 6/54 (11%)

Query: 161 AKYFLDKVHIIKQADYTPTEQDILRCRVLTSGIFETQFVVDKVNFHMFDVGGQR 214
           A YFLD  + I      P E+ +   R++ +  FE+  + +    H+ DV   R
Sbjct: 368 APYFLDYNYTI------PKEKHVEVARLIRNYYFESNKIDETTLKHLIDVASDR 415


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 9/30 (30%), Positives = 15/30 (50%)

Query: 342 KHYCYPHFTCAVDTENIKRVFNDCRDIIQR 371
           K   Y H    +D+  IK   + C+ +I+R
Sbjct: 65  KGVTYKHTIIEMDSNPIKTALSVCKSLIER 94


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 9/19 (47%), Positives = 14/19 (73%)

Query: 5   KSLGGHRNESEDAKEQRRR 23
           ++LG  RN  ED++E R+R
Sbjct: 475 ENLGDGRNNKEDSEEFRQR 493


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 6/54 (11%)

Query: 161 AKYFLDKVHIIKQADYTPTEQDILRCRVLTSGIFETQFVVDKVNFHMFDVGGQR 214
           A YFLD  + I      P E+ +   R++ +  FE+  + +    H+ DV   R
Sbjct: 368 APYFLDYNYTI------PKEKHVEVARLIRNYYFESNKIDETTLKHLIDVASDR 415


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.322    0.137    0.415 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,336
Number of Sequences: 429
Number of extensions: 4691
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 6
length of query: 380
length of database: 140,377
effective HSP length: 59
effective length of query: 321
effective length of database: 115,066
effective search space: 36936186
effective search space used: 36936186
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 44 (21.8 bits)