Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA004342-TA|BGIBMGA004342-PA|undefined
(135 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC067120-1|AAH67120.1| 754|Homo sapiens protein tyrosine phosph... 50 3e-06
AY171233-1|AAO13168.1| 754|Homo sapiens protein tyrosine phosph... 50 3e-06
AL360020-3|CAI14621.2| 806|Homo sapiens protein tyrosine phosph... 50 3e-06
AL360020-2|CAM20720.1| 754|Homo sapiens protein tyrosine phosph... 50 3e-06
AK094631-1|BAC04391.1| 394|Homo sapiens protein ( Homo sapiens ... 50 3e-06
AK094773-1|BAC04421.1| 140|Homo sapiens protein ( Homo sapiens ... 48 1e-05
AY884293-1|AAX84184.1| 1117|Homo sapiens cytospin A protein. 29 5.2
AB209022-1|BAD92259.1| 939|Homo sapiens KIAA0376 protein varian... 29 5.2
AB002374-1|BAA21574.1| 885|Homo sapiens KIAA0376 protein. 29 5.2
BC011621-1|AAH11621.1| 728|Homo sapiens hook homolog 1 (Drosoph... 29 6.8
AL035416-6|CAI22779.1| 728|Homo sapiens hook homolog 1 (Drosoph... 29 6.8
AF044923-1|AAC09298.1| 728|Homo sapiens hook1 protein protein. 29 6.8
U04898-1|AAA62659.1| 556|Homo sapiens RORalpha2 protein. 28 9.0
BC132874-1|AAI32875.1| 1071|Homo sapiens SLIT-ROBO Rho GTPase ac... 28 9.0
BC132872-1|AAI32873.1| 1071|Homo sapiens SLIT-ROBO Rho GTPase ac... 28 9.0
BC063790-1|AAH63790.1| 411|Homo sapiens FLJ30058 protein protein. 28 9.0
AL590131-4|CAI41401.1| 411|Homo sapiens novel protein protein. 28 9.0
AL590131-1|CAI41398.1| 535|Homo sapiens novel protein protein. 28 9.0
AL391883-2|CAI17041.1| 398|Homo sapiens OTU domain containing 3... 28 9.0
AL161736-3|CAH73675.1| 450|Homo sapiens SLIT-ROBO Rho GTPase ac... 28 9.0
AL161736-2|CAH73674.1| 984|Homo sapiens SLIT-ROBO Rho GTPase ac... 28 9.0
AK128203-1|BAC87322.1| 547|Homo sapiens protein ( Homo sapiens ... 28 9.0
AK054620-1|BAB70776.1| 411|Homo sapiens protein ( Homo sapiens ... 28 9.0
AB007928-1|BAA32304.2| 430|Homo sapiens KIAA0459 protein protein. 28 9.0
AB007925-1|BAA32301.1| 1095|Homo sapiens KIAA0456 protein protein. 28 9.0
>BC067120-1|AAH67120.1| 754|Homo sapiens protein tyrosine
phosphatase domain containing 1 protein.
Length = 754
Score = 49.6 bits (113), Expect = 3e-06
Identities = 20/72 (27%), Positives = 40/72 (55%)
Query: 49 QEKQTRLRHLRNDINQRREAMAMIDDEEDPFILTGLLFEWFEGLKQPILDKDDLSIIVGH 108
+E + ++ + ++N R A I E DPFIL L++ W E LK+P++ K+D+ ++V
Sbjct: 607 EELKRKVEMWQKELNSRDGAWERICGERDPFILCSLMWSWVEQLKEPVITKEDVDMLVDR 666
Query: 109 SCNVESCVLAMQ 120
+ + ++
Sbjct: 667 RADAAEALFLLE 678
>AY171233-1|AAO13168.1| 754|Homo sapiens protein tyrosine
phosphatase protein.
Length = 754
Score = 49.6 bits (113), Expect = 3e-06
Identities = 20/72 (27%), Positives = 40/72 (55%)
Query: 49 QEKQTRLRHLRNDINQRREAMAMIDDEEDPFILTGLLFEWFEGLKQPILDKDDLSIIVGH 108
+E + ++ + ++N R A I E DPFIL L++ W E LK+P++ K+D+ ++V
Sbjct: 607 EELKRKVEMWQKELNSRDGAWERICGERDPFILCSLMWSWVEQLKEPVITKEDVDMLVDR 666
Query: 109 SCNVESCVLAMQ 120
+ + ++
Sbjct: 667 RADAAEALFLLE 678
>AL360020-3|CAI14621.2| 806|Homo sapiens protein tyrosine
phosphatase domain containing 1 protein.
Length = 806
Score = 49.6 bits (113), Expect = 3e-06
Identities = 20/72 (27%), Positives = 40/72 (55%)
Query: 49 QEKQTRLRHLRNDINQRREAMAMIDDEEDPFILTGLLFEWFEGLKQPILDKDDLSIIVGH 108
+E + ++ + ++N R A I E DPFIL L++ W E LK+P++ K+D+ ++V
Sbjct: 659 EELKRKVEMWQKELNSRDGAWERICGERDPFILCSLMWSWVEQLKEPVITKEDVDMLVDR 718
Query: 109 SCNVESCVLAMQ 120
+ + ++
Sbjct: 719 RADAAEALFLLE 730
>AL360020-2|CAM20720.1| 754|Homo sapiens protein tyrosine
phosphatase domain containing 1 protein.
Length = 754
Score = 49.6 bits (113), Expect = 3e-06
Identities = 20/72 (27%), Positives = 40/72 (55%)
Query: 49 QEKQTRLRHLRNDINQRREAMAMIDDEEDPFILTGLLFEWFEGLKQPILDKDDLSIIVGH 108
+E + ++ + ++N R A I E DPFIL L++ W E LK+P++ K+D+ ++V
Sbjct: 607 EELKRKVEMWQKELNSRDGAWERICGERDPFILCSLMWSWVEQLKEPVITKEDVDMLVDR 666
Query: 109 SCNVESCVLAMQ 120
+ + ++
Sbjct: 667 RADAAEALFLLE 678
>AK094631-1|BAC04391.1| 394|Homo sapiens protein ( Homo sapiens
cDNA FLJ37312 fis, clone BRAMY2016892. ).
Length = 394
Score = 49.6 bits (113), Expect = 3e-06
Identities = 20/72 (27%), Positives = 40/72 (55%)
Query: 49 QEKQTRLRHLRNDINQRREAMAMIDDEEDPFILTGLLFEWFEGLKQPILDKDDLSIIVGH 108
+E + ++ + ++N R A I E DPFIL L++ W E LK+P++ K+D+ ++V
Sbjct: 247 EELKRKVEMWQKELNSRDGAWERICGERDPFILCSLMWSWVEQLKEPVITKEDVDMLVDR 306
Query: 109 SCNVESCVLAMQ 120
+ + ++
Sbjct: 307 RADAAEALFLLE 318
>AK094773-1|BAC04421.1| 140|Homo sapiens protein ( Homo sapiens
cDNA FLJ37454 fis, clone BRAWH2011066. ).
Length = 140
Score = 48.0 bits (109), Expect = 1e-05
Identities = 19/62 (30%), Positives = 35/62 (56%)
Query: 59 RNDINQRREAMAMIDDEEDPFILTGLLFEWFEGLKQPILDKDDLSIIVGHSCNVESCVLA 118
+ ++N R A I E DPFIL L++ W E LK+P++ K+D+ ++V + +
Sbjct: 3 QKELNSRDGAWERICGERDPFILCSLMWSWVEQLKEPVITKEDVDMLVDRRADAAEALFL 62
Query: 119 MQ 120
++
Sbjct: 63 LE 64
>AY884293-1|AAX84184.1| 1117|Homo sapiens cytospin A protein.
Length = 1117
Score = 29.1 bits (62), Expect = 5.2
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 47 LPQEKQTRLRHLRNDINQRREAMAMIDDEEDPF 79
L Q L H RND N+ ++A+A ++DE F
Sbjct: 622 LASSLQEDLAHTRNDANRLQDAIAKVEDEYRAF 654
>AB209022-1|BAD92259.1| 939|Homo sapiens KIAA0376 protein variant
protein.
Length = 939
Score = 29.1 bits (62), Expect = 5.2
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 47 LPQEKQTRLRHLRNDINQRREAMAMIDDEEDPF 79
L Q L H RND N+ ++A+A ++DE F
Sbjct: 650 LASSLQEDLAHTRNDANRLQDAIAKVEDEYRAF 682
>AB002374-1|BAA21574.1| 885|Homo sapiens KIAA0376 protein.
Length = 885
Score = 29.1 bits (62), Expect = 5.2
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 47 LPQEKQTRLRHLRNDINQRREAMAMIDDEEDPF 79
L Q L H RND N+ ++A+A ++DE F
Sbjct: 466 LASSLQEDLAHTRNDANRLQDAIAKVEDEYRAF 498
>BC011621-1|AAH11621.1| 728|Homo sapiens hook homolog 1
(Drosophila) protein.
Length = 728
Score = 28.7 bits (61), Expect = 6.8
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 10 EDIERSL-ESVSRITGSSTNGCLPALQVY-EAFIADHSDLPQEKQTRLRHLRNDINQ 64
ED+++SL E S+ G S++ L+ + E H +L Q+KQ + L+ DINQ
Sbjct: 525 EDLQKSLQEQGSKSEGESSSKLKQKLEAHMEKLTEVHEEL-QKKQELIEDLQPDINQ 580
>AL035416-6|CAI22779.1| 728|Homo sapiens hook homolog 1
(Drosophila) protein.
Length = 728
Score = 28.7 bits (61), Expect = 6.8
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 10 EDIERSL-ESVSRITGSSTNGCLPALQVY-EAFIADHSDLPQEKQTRLRHLRNDINQ 64
ED+++SL E S+ G S++ L+ + E H +L Q+KQ + L+ DINQ
Sbjct: 525 EDLQKSLQEQGSKSEGESSSKLKQKLEAHMEKLTEVHEEL-QKKQELIEDLQPDINQ 580
>AF044923-1|AAC09298.1| 728|Homo sapiens hook1 protein protein.
Length = 728
Score = 28.7 bits (61), Expect = 6.8
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 10 EDIERSL-ESVSRITGSSTNGCLPALQVY-EAFIADHSDLPQEKQTRLRHLRNDINQ 64
ED+++SL E S+ G S++ L+ + E H +L Q+KQ + L+ DINQ
Sbjct: 525 EDLQKSLQEQGSKSEGESSSKLKQKLEAHMEKLTEVHEEL-QKKQELIEDLQPDINQ 580
>U04898-1|AAA62659.1| 556|Homo sapiens RORalpha2 protein.
Length = 556
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 77 DPFILTGLLFEWFEGLKQPILDKDDLSIIVGH 108
D F+LTG+ W + K P K+D + G+
Sbjct: 65 DAFVLTGVCCSWRQNGKPPYSQKEDKEVQTGY 96
>BC132874-1|AAI32875.1| 1071|Homo sapiens SLIT-ROBO Rho GTPase
activating protein 2 protein.
Length = 1071
Score = 28.3 bits (60), Expect = 9.0
Identities = 12/49 (24%), Positives = 25/49 (51%)
Query: 52 QTRLRHLRNDINQRREAMAMIDDEEDPFILTGLLFEWFEGLKQPILDKD 100
Q + ++N + + +A ++ D + G+L +F GL+ P+ KD
Sbjct: 532 QVEVNDIKNAFERGEDPLAGDQNDHDMDSIAGVLKLYFRGLEHPLFPKD 580
>BC132872-1|AAI32873.1| 1071|Homo sapiens SLIT-ROBO Rho GTPase
activating protein 2 protein.
Length = 1071
Score = 28.3 bits (60), Expect = 9.0
Identities = 12/49 (24%), Positives = 25/49 (51%)
Query: 52 QTRLRHLRNDINQRREAMAMIDDEEDPFILTGLLFEWFEGLKQPILDKD 100
Q + ++N + + +A ++ D + G+L +F GL+ P+ KD
Sbjct: 532 QVEVNDIKNAFERGEDPLAGDQNDHDMDSIAGVLKLYFRGLEHPLFPKD 580
>BC063790-1|AAH63790.1| 411|Homo sapiens FLJ30058 protein protein.
Length = 411
Score = 28.3 bits (60), Expect = 9.0
Identities = 17/70 (24%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 54 RLRHLRNDINQRREAMAMIDDEEDPFILTGLLFEWFEGLKQPILDKD-DLSIIVGHSCNV 112
R+R LR + +Q + + +DD ++ + LL E+F +K +L D +S ++ +
Sbjct: 129 RVRQLREEFDQGLDVV--LDDNQNVHDVAALLKEFFRDMKDSLLPDDLYMSFLLTATLKP 186
Query: 113 ESCVLAMQMM 122
+ + A+Q++
Sbjct: 187 QDQLSALQLL 196
>AL590131-4|CAI41401.1| 411|Homo sapiens novel protein protein.
Length = 411
Score = 28.3 bits (60), Expect = 9.0
Identities = 17/70 (24%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 54 RLRHLRNDINQRREAMAMIDDEEDPFILTGLLFEWFEGLKQPILDKD-DLSIIVGHSCNV 112
R+R LR + +Q + + +DD ++ + LL E+F +K +L D +S ++ +
Sbjct: 129 RVRQLREEFDQGLDVV--LDDNQNVHDVAALLKEFFRDMKDSLLPDDLYMSFLLTATLKP 186
Query: 113 ESCVLAMQMM 122
+ + A+Q++
Sbjct: 187 QDQLSALQLL 196
>AL590131-1|CAI41398.1| 535|Homo sapiens novel protein protein.
Length = 535
Score = 28.3 bits (60), Expect = 9.0
Identities = 17/70 (24%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 54 RLRHLRNDINQRREAMAMIDDEEDPFILTGLLFEWFEGLKQPILDKD-DLSIIVGHSCNV 112
R+R LR + +Q + + +DD ++ + LL E+F +K +L D +S ++ +
Sbjct: 253 RVRQLREEFDQGLDVV--LDDNQNVHDVAALLKEFFRDMKDSLLPDDLYMSFLLTATLKP 310
Query: 113 ESCVLAMQMM 122
+ + A+Q++
Sbjct: 311 QDQLSALQLL 320
>AL391883-2|CAI17041.1| 398|Homo sapiens OTU domain containing 3
protein.
Length = 398
Score = 28.3 bits (60), Expect = 9.0
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 16/97 (16%)
Query: 41 IADHSDLPQEKQTRLRHLRNDINQRREAMAM--IDDEEDPFILTGLLFEWFEGLKQPILD 98
I D+S+ P QT + L D + +RE + +D E+D L + E Q + +
Sbjct: 189 INDNSEAPAHLQTDFQMLHQDESNKREKIKTKGMDSEDD-------LRDEVEDAVQKVCN 241
Query: 99 K---DDLSIIV----GHSCNVESCVLAMQMMNTGCTN 128
D ++IV + N+ES ++A+ MN G N
Sbjct: 242 ATGCSDFNLIVQNLEAENYNIESAIIAVLRMNQGKRN 278
>AL161736-3|CAH73675.1| 450|Homo sapiens SLIT-ROBO Rho GTPase
activating protein 2 protein.
Length = 450
Score = 28.3 bits (60), Expect = 9.0
Identities = 12/49 (24%), Positives = 25/49 (51%)
Query: 52 QTRLRHLRNDINQRREAMAMIDDEEDPFILTGLLFEWFEGLKQPILDKD 100
Q + ++N + + +A ++ D + G+L +F GL+ P+ KD
Sbjct: 146 QVEVNDIKNAFERGEDPLAGDQNDHDMDSIAGVLKLYFRGLEHPLFPKD 194
>AL161736-2|CAH73674.1| 984|Homo sapiens SLIT-ROBO Rho GTPase
activating protein 2 protein.
Length = 984
Score = 28.3 bits (60), Expect = 9.0
Identities = 12/49 (24%), Positives = 25/49 (51%)
Query: 52 QTRLRHLRNDINQRREAMAMIDDEEDPFILTGLLFEWFEGLKQPILDKD 100
Q + ++N + + +A ++ D + G+L +F GL+ P+ KD
Sbjct: 445 QVEVNDIKNAFERGEDPLAGDQNDHDMDSIAGVLKLYFRGLEHPLFPKD 493
>AK128203-1|BAC87322.1| 547|Homo sapiens protein ( Homo sapiens
cDNA FLJ46335 fis, clone TESTI4046073, weakly similar
to Rho-GTPase-activating protein 6. ).
Length = 547
Score = 28.3 bits (60), Expect = 9.0
Identities = 17/70 (24%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 54 RLRHLRNDINQRREAMAMIDDEEDPFILTGLLFEWFEGLKQPILDKD-DLSIIVGHSCNV 112
R+R LR + +Q + + +DD ++ + LL E+F +K +L D +S ++ +
Sbjct: 265 RVRQLREEFDQGLDVV--LDDNQNVHDVAALLKEFFRDMKDSLLPDDLYMSFLLTATLKP 322
Query: 113 ESCVLAMQMM 122
+ + A+Q++
Sbjct: 323 QDQLSALQLL 332
>AK054620-1|BAB70776.1| 411|Homo sapiens protein ( Homo sapiens
cDNA FLJ30058 fis, clone ADRGL2000074, weakly similar to
RHO-GTPASE-ACTIVATING PROTEIN 6. ).
Length = 411
Score = 28.3 bits (60), Expect = 9.0
Identities = 17/70 (24%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 54 RLRHLRNDINQRREAMAMIDDEEDPFILTGLLFEWFEGLKQPILDKD-DLSIIVGHSCNV 112
R+R LR + +Q + + +DD ++ + LL E+F +K +L D +S ++ +
Sbjct: 129 RVRQLREEFDQGLDVV--LDDNQNVHDVAALLKEFFRDMKDSLLPDDLYMSFLLTATLKP 186
Query: 113 ESCVLAMQMM 122
+ + A+Q++
Sbjct: 187 QDQLSALQLL 196
>AB007928-1|BAA32304.2| 430|Homo sapiens KIAA0459 protein protein.
Length = 430
Score = 28.3 bits (60), Expect = 9.0
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 16/97 (16%)
Query: 41 IADHSDLPQEKQTRLRHLRNDINQRREAMAM--IDDEEDPFILTGLLFEWFEGLKQPILD 98
I D+S+ P QT + L D + +RE + +D E+D L + E Q + +
Sbjct: 221 INDNSEAPAHLQTDFQMLHQDESNKREKIKTKGMDSEDD-------LRDEVEDAVQKVCN 273
Query: 99 K---DDLSIIV----GHSCNVESCVLAMQMMNTGCTN 128
D ++IV + N+ES ++A+ MN G N
Sbjct: 274 ATGCSDFNLIVQNLEAENYNIESAIIAVLRMNQGKRN 310
>AB007925-1|BAA32301.1| 1095|Homo sapiens KIAA0456 protein protein.
Length = 1095
Score = 28.3 bits (60), Expect = 9.0
Identities = 12/49 (24%), Positives = 25/49 (51%)
Query: 52 QTRLRHLRNDINQRREAMAMIDDEEDPFILTGLLFEWFEGLKQPILDKD 100
Q + ++N + + +A ++ D + G+L +F GL+ P+ KD
Sbjct: 556 QVEVNDIKNAFERGEDPLAGDQNDHDMDSIAGVLKLYFRGLEHPLFPKD 604
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.318 0.133 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,709,903
Number of Sequences: 224733
Number of extensions: 671562
Number of successful extensions: 2356
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 2339
Number of HSP's gapped (non-prelim): 25
length of query: 135
length of database: 73,234,838
effective HSP length: 82
effective length of query: 53
effective length of database: 54,806,732
effective search space: 2904756796
effective search space used: 2904756796
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 60 (28.3 bits)
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