GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004322-TA|BGIBMGA004322-PA|undefined
         (437 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    27   0.31 
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    25   1.3  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   3.8  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   5.1  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    23   6.7  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   8.8  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   8.8  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     22   8.8  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   8.8  

>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 27.1 bits (57), Expect = 0.31
 Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 3/82 (3%)

Query: 36  TTKLGRRSEENTESNGMMIIEIKSEPRDFEDLADPLQTIKIPLLLHTGKTEQLIKNETCN 95
           T ++ R    NT++  +      S P D +DL +PL TI+    L    + ++ K  T  
Sbjct: 257 TLRIHRGGGTNTDARHLFRTA-SSTPEDLQDLEEPLTTIQHNNCLTRIPSTRINKQHTRG 315

Query: 96  TDF--GEDVVKTEKNQNISPTL 115
            +F     + K  K +  + TL
Sbjct: 316 NNFSLSRKLAKFAKEKKAAKTL 337


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 25.0 bits (52), Expect = 1.3
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 133 VCVYGNVHDTHDSKDLTSTKVCEDEPM 159
           V +Y N+ +T +   L  TKV ED P+
Sbjct: 646 VDMYANMIETMELTSLLLTKVAEDRPL 672


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.4 bits (48), Expect = 3.8
 Identities = 10/23 (43%), Positives = 13/23 (56%)

Query: 29   DQDLDNETTKLGRRSEENTESNG 51
            D+D   ++TKL R S E    NG
Sbjct: 1410 DEDSTRDSTKLDRSSREREVHNG 1432


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 10/34 (29%), Positives = 17/34 (50%)

Query: 39  LGRRSEENTESNGMMIIEIKSEPRDFEDLADPLQ 72
           L R  +E    N  + ++ K E    ED+ DP++
Sbjct: 139 LERLFDEKNAGNNKITMKSKKEQNAEEDIVDPVE 172


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 22.6 bits (46), Expect = 6.7
 Identities = 11/40 (27%), Positives = 19/40 (47%)

Query: 117 YLRETVENSNEIVPKIVCVYGNVHDTHDSKDLTSTKVCED 156
           Y+RE   + + +  +I+C + NV D   +K       C D
Sbjct: 426 YVREIAFSESCLPEEILCPHFNVTDGETTKTFCCKGYCMD 465


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 8.8
 Identities = 21/95 (22%), Positives = 39/95 (41%), Gaps = 5/95 (5%)

Query: 144 DSKDLTSTKVCEDEPMIVEETKCHRDDTNNVSNAEDIQEKVLQETNIILKSEMEEQLHLN 203
           D   L  TK+      +   TK  ++    +     + +KV+Q     LK E  +    N
Sbjct: 218 DILHLRHTKIWLRPDWLFNLTKYGKNQIKLLEIIHGLTKKVIQ-----LKKEEYKSGKRN 272

Query: 204 IFDNVIEFADNKVQSIENDHVNTVHVIQTKNDFTL 238
           I DN  +  ++K  +I  + V+    +  K+D  +
Sbjct: 273 IIDNSAQKTESKTNNIVVEGVSFGQSVGLKDDLDI 307


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 8.8
 Identities = 7/11 (63%), Positives = 11/11 (100%)

Query: 223 HVNTVHVIQTK 233
           H+NTV+V++TK
Sbjct: 269 HINTVYVLRTK 279


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 22.2 bits (45), Expect = 8.8
 Identities = 12/48 (25%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 272 KLQGCNLKDSLKQLNITEIQTDVNKITNRINSDISNTMNNTLFLESKS 319
           ++ G N+ +  K  NI +++  +    N+I   +     N L  ESK+
Sbjct: 157 QMNGNNITN-FKNSNIFQLKQHMRDTMNKIAETLDEDTKNKLIEESKT 203


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 8.8
 Identities = 7/11 (63%), Positives = 11/11 (100%)

Query: 223 HVNTVHVIQTK 233
           H+NTV+V++TK
Sbjct: 269 HINTVYVLRTK 279


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.312    0.129    0.360 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,077
Number of Sequences: 429
Number of extensions: 6310
Number of successful extensions: 21
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 13
Number of HSP's gapped (non-prelim): 10
length of query: 437
length of database: 140,377
effective HSP length: 60
effective length of query: 377
effective length of database: 114,637
effective search space: 43218149
effective search space used: 43218149
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 45 (22.2 bits)