GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004319-TA|BGIBMGA004319-PA|undefined
         (181 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    22   3.0  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   5.3  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   9.3  

>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 10/21 (47%), Positives = 13/21 (61%)

Query: 155 NIFKAHFEIKTFRGEFVFIND 175
           NI   HFE+K  R   VF+N+
Sbjct: 261 NIQLEHFEMKIKRKHNVFVNN 281


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 10/23 (43%), Positives = 14/23 (60%)

Query: 60  LQPLIDLFELVTKFDIEDRSGDS 82
           L+PL+ L +LV    +E   GDS
Sbjct: 715 LKPLLSLEDLVRFSTLEGSGGDS 737


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 6/12 (50%), Positives = 10/12 (83%)

Query: 40  LVHEKIDLIERD 51
           ++H K D+IE+D
Sbjct: 240 IIHPKYDIIEKD 251


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.134    0.403 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,544
Number of Sequences: 429
Number of extensions: 2267
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 181
length of database: 140,377
effective HSP length: 54
effective length of query: 127
effective length of database: 117,211
effective search space: 14885797
effective search space used: 14885797
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 41 (20.6 bits)