GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004297-TA|BGIBMGA004297-PA|undefined
         (107 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   0.79 
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    21   2.4  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   2.4  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         20   7.4  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    20   7.4  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    20   7.4  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    20   7.4  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    20   7.4  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 23.0 bits (47), Expect = 0.79
 Identities = 8/36 (22%), Positives = 21/36 (58%)

Query: 65  TQKPKSSKKHVPIVIDASETTDDRIGRIGPKLVVFD 100
           T++P   +++  ++ D  ++ DDR  R+  +++  D
Sbjct: 279 TERPSDRQRNEILLSDELDSVDDRTLRLKGQMIYMD 314



 Score = 19.4 bits (38), Expect = 9.8
 Identities = 6/13 (46%), Positives = 11/13 (84%)

Query: 28  VFGNDMVLKDNGD 40
           VFG+DM+++  G+
Sbjct: 217 VFGSDMIVRSIGN 229


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 21.4 bits (43), Expect = 2.4
 Identities = 7/14 (50%), Positives = 10/14 (71%)

Query: 94  PKLVVFDASTGKII 107
           PKL+ FD  T K++
Sbjct: 158 PKLLTFDLKTSKLV 171


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 2.4
 Identities = 7/14 (50%), Positives = 11/14 (78%)

Query: 94  PKLVVFDASTGKII 107
           PKL+ FD +T K++
Sbjct: 156 PKLLAFDLNTSKLL 169


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 19.8 bits (39), Expect = 7.4
 Identities = 6/14 (42%), Positives = 11/14 (78%)

Query: 94  PKLVVFDASTGKII 107
           PKL+ FD +T +++
Sbjct: 152 PKLLTFDLTTSQLL 165


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 19.8 bits (39), Expect = 7.4
 Identities = 6/9 (66%), Positives = 9/9 (100%)

Query: 45  RSKYINHVR 53
           RS+Y+NH+R
Sbjct: 431 RSEYLNHLR 439


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 19.8 bits (39), Expect = 7.4
 Identities = 6/14 (42%), Positives = 12/14 (85%)

Query: 94  PKLVVFDASTGKII 107
           P+L+VFD +T +++
Sbjct: 150 PQLLVFDLNTSQLL 163


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 19.8 bits (39), Expect = 7.4
 Identities = 6/14 (42%), Positives = 11/14 (78%)

Query: 94  PKLVVFDASTGKII 107
           PKL+ FD +T +++
Sbjct: 152 PKLLTFDLTTSQLL 165


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 19.8 bits (39), Expect = 7.4
 Identities = 6/14 (42%), Positives = 11/14 (78%)

Query: 94  PKLVVFDASTGKII 107
           PKL+ FD +T +++
Sbjct: 152 PKLLTFDLTTSQLL 165


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.316    0.132    0.367 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,066
Number of Sequences: 429
Number of extensions: 970
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of query: 107
length of database: 140,377
effective HSP length: 50
effective length of query: 57
effective length of database: 118,927
effective search space:  6778839
effective search space used:  6778839
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.2 bits)
S2: 38 (19.4 bits)