GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004290-TA|BGIBMGA004290-PA|undefined
         (121 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   1.7  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    22   1.7  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    22   2.2  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    22   2.2  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    22   2.2  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   5.2  

>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 9/14 (64%), Positives = 11/14 (78%)

Query: 31  GLAIGSIAPNDRLL 44
           GLA+G I  NDR+L
Sbjct: 250 GLALGPIRNNDRIL 263


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query: 87  TVRLVGGGVGSTFVTLQFRNSARRGYHFNVQI 118
           +VRL+  G    FVT+Q +      ++ N+ I
Sbjct: 301 SVRLISSGFFDNFVTVQIQPLKNELFNANIGI 332


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
          protein.
          Length = 130

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 9/26 (34%), Positives = 16/26 (61%)

Query: 22 DPSSTSRANGLAIGSIAPNDRLLRSF 47
          D S TS+ + + +  I  +DRLL ++
Sbjct: 22 DESYTSKFDNINVDEILHSDRLLNNY 47


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
          protein.
          Length = 130

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 9/26 (34%), Positives = 16/26 (61%)

Query: 22 DPSSTSRANGLAIGSIAPNDRLLRSF 47
          D S TS+ + + +  I  +DRLL ++
Sbjct: 22 DESYTSKFDNINVDEILHSDRLLNNY 47


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
          protein 3c precursor protein.
          Length = 130

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 9/26 (34%), Positives = 16/26 (61%)

Query: 22 DPSSTSRANGLAIGSIAPNDRLLRSF 47
          D S TS+ + + +  I  +DRLL ++
Sbjct: 22 DESYTSKFDNINVDEILHSDRLLNNY 47


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 20.6 bits (41), Expect = 5.2
 Identities = 9/16 (56%), Positives = 14/16 (87%), Gaps = 1/16 (6%)

Query: 17  TDEVADPSSTSRANGL 32
           +DE A+PSSTS+ +G+
Sbjct: 272 SDE-AEPSSTSKKSGI 286


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.129    0.365 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,784
Number of Sequences: 429
Number of extensions: 453
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 121
length of database: 140,377
effective HSP length: 51
effective length of query: 70
effective length of database: 118,498
effective search space:  8294860
effective search space used:  8294860
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.9 bits)
S2: 39 (19.8 bits)