Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA004286-TA|BGIBMGA004286-PA|undefined
(120 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB019437-26|BAA75025.1| 117|Homo sapiens immunogloblin heavy ch... 30 1.7
AY452138-1|AAS15727.1| 185|Homo sapiens immunoglobulin heavy ch... 30 2.2
AM082308-1|CAL06454.1| 101|Homo sapiens immunoglobulin heavy ch... 29 2.9
BC064940-1|AAH64940.1| 484|Homo sapiens N-PAC protein protein. 29 3.8
BC047223-1|AAH47223.1| 553|Homo sapiens cytokine-like nuclear f... 29 3.8
BC032855-1|AAH32855.1| 553|Homo sapiens cytokine-like nuclear f... 29 3.8
BC003693-1|AAH03693.1| 523|Homo sapiens Similar to RIKEN cDNA 3... 29 3.8
AY352585-1|AAQ57265.1| 553|Homo sapiens cytokine-like nuclear f... 29 3.8
AK091690-1|BAC03721.1| 240|Homo sapiens protein ( Homo sapiens ... 29 3.8
AF471471-1|AAQ05646.1| 122|Homo sapiens Ig heavy chain variable... 29 3.8
AF326966-1|AAK15524.1| 547|Homo sapiens cytokine-like nuclear f... 29 3.8
AF244907-1|AAQ14242.1| 553|Homo sapiens 3-hydroxyisobutyrate de... 29 3.8
AB016898-1|BAA78633.1| 254|Homo sapiens HGC6.4 protein. 29 3.8
AM082584-1|CAL06730.1| 101|Homo sapiens immunoglobulin heavy ch... 29 5.1
AM079328-1|CAL03474.1| 101|Homo sapiens immunoglobulin heavy ch... 28 6.7
AM078972-1|CAL03118.1| 101|Homo sapiens immunoglobulin heavy ch... 28 6.7
AK129729-1|BAC85229.1| 168|Homo sapiens protein ( Homo sapiens ... 28 6.7
AM080229-1|CAL04375.1| 101|Homo sapiens immunoglobulin heavy ch... 28 8.8
AF245313-1|AAK12852.1| 140|Homo sapiens immunoglobulin heavy ch... 28 8.8
>AB019437-26|BAA75025.1| 117|Homo sapiens immunogloblin heavy chain
variable region protein.
Length = 117
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 56 SWAHPLTLFAPTGTRINAIRAREVGASQSGSIRLTHGGLGSTFAAFD---ITNAAGRGLN 112
SW + +F + + + E GS+RL+ G TF+++ + A G+GL
Sbjct: 6 SWVFLVAIFKGVQCEVQLVESGEGLVQPGGSLRLSCAASGFTFSSYAMHWVRQAPGKGLE 65
Query: 113 Y 113
Y
Sbjct: 66 Y 66
>AY452138-1|AAS15727.1| 185|Homo sapiens immunoglobulin heavy chain
protein.
Length = 185
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Query: 56 SWAHPLTLFAPTGTRINAIRAREVGASQSGSIRLTHGGLGSTFAAFD---ITNAAGRGLN 112
SW P+ +F + + + E GS+RL+ G TF+++ + A G+GL
Sbjct: 2 SW-FPVAIFKGVQCEVQLVESGEGLVQPGGSLRLSCAASGFTFSSYAMHWVRQAPGKGLE 60
Query: 113 Y 113
Y
Sbjct: 61 Y 61
>AM082308-1|CAL06454.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 3/32 (9%)
Query: 85 GSIRLTHGGLGSTFAAFDIT---NAAGRGLNY 113
GS+RL+ G G TF+++D+T A G+GL +
Sbjct: 19 GSLRLSCAGSGFTFSSYDMTWVRQAPGKGLEW 50
>BC064940-1|AAH64940.1| 484|Homo sapiens N-PAC protein protein.
Length = 484
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 23 FDSFRRSTLNLGVIGNQDRLLRSENFVRASMVSSWAHPLTLFAPTG 68
F + +++ LG +GN +++ N V+ S +++ A LTL TG
Sbjct: 348 FQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTG 393
>BC047223-1|AAH47223.1| 553|Homo sapiens cytokine-like nuclear
factor n-pac protein.
Length = 553
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 23 FDSFRRSTLNLGVIGNQDRLLRSENFVRASMVSSWAHPLTLFAPTG 68
F + +++ LG +GN +++ N V+ S +++ A LTL TG
Sbjct: 417 FQTMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTG 462
>BC032855-1|AAH32855.1| 553|Homo sapiens cytokine-like nuclear
factor n-pac protein.
Length = 553
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 23 FDSFRRSTLNLGVIGNQDRLLRSENFVRASMVSSWAHPLTLFAPTG 68
F + +++ LG +GN +++ N V+ S +++ A LTL TG
Sbjct: 417 FQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTG 462
>BC003693-1|AAH03693.1| 523|Homo sapiens Similar to RIKEN cDNA
3930401K13 gene protein.
Length = 523
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 23 FDSFRRSTLNLGVIGNQDRLLRSENFVRASMVSSWAHPLTLFAPTG 68
F + +++ LG +GN +++ N V+ S +++ A LTL TG
Sbjct: 387 FQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTG 432
>AY352585-1|AAQ57265.1| 553|Homo sapiens cytokine-like nuclear
factor n-pac-like protein protein.
Length = 553
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 23 FDSFRRSTLNLGVIGNQDRLLRSENFVRASMVSSWAHPLTLFAPTG 68
F + +++ LG +GN +++ N V+ S +++ A LTL TG
Sbjct: 417 FQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTG 462
>AK091690-1|BAC03721.1| 240|Homo sapiens protein ( Homo sapiens
cDNA FLJ34371 fis, clone FEBRA2017200. ).
Length = 240
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Query: 85 GSIRLTHGGLGSTFAAFDITNAAGRGLNYRVEIW 118
GS+R+ GG S +AA D AG G ++RV +W
Sbjct: 42 GSVRM--GGARSKWAAPDPMGGAGFGPDWRVRVW 73
>AF471471-1|AAQ05646.1| 122|Homo sapiens Ig heavy chain variable
region, VH3 family protein.
Length = 122
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Query: 80 GASQSG-SIRLTHGGLGSTFAAFD---ITNAAGRGLNYRVEIW 118
GA Q G S+RL+ G G TF+++ + A G+GL + IW
Sbjct: 10 GAVQPGRSLRLSCGASGFTFSSYAMHWVRQAPGKGLEWVAGIW 52
>AF326966-1|AAK15524.1| 547|Homo sapiens cytokine-like nuclear
factor n-pac protein.
Length = 547
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 23 FDSFRRSTLNLGVIGNQDRLLRSENFVRASMVSSWAHPLTLFAPTG 68
F + +++ LG +GN +++ N V+ S +++ A LTL TG
Sbjct: 411 FQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTG 456
>AF244907-1|AAQ14242.1| 553|Homo sapiens 3-hydroxyisobutyrate
dehydrogenase-like protein HIBDL protein.
Length = 553
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 23 FDSFRRSTLNLGVIGNQDRLLRSENFVRASMVSSWAHPLTLFAPTG 68
F + +++ LG +GN +++ N V+ S +++ A LTL TG
Sbjct: 417 FQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTG 462
>AB016898-1|BAA78633.1| 254|Homo sapiens HGC6.4 protein.
Length = 254
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Query: 85 GSIRLTHGGLGSTFAAFDITNAAGRGLNYRVEIW 118
GS+R+ GG S +AA D AG G ++RV +W
Sbjct: 56 GSVRM--GGARSKWAAPDPMGGAGFGPDWRVRVW 87
>AM082584-1|CAL06730.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Query: 85 GSIRLTHGGLGSTFAAFDIT---NAAGRGLNYRVEIWGR 120
GS+RL+ GSTF+++ +T A G+GL + I GR
Sbjct: 19 GSLRLSCAASGSTFSSYAMTWVRQAPGKGLEWVSTISGR 57
>AM079328-1|CAL03474.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
Query: 85 GSIRLTHGGLGSTFAAFDIT---NAAGRGLNY 113
GS+RL+ G G TF +D+T A G+GL +
Sbjct: 19 GSLRLSCGASGFTFKTYDMTWVRQAPGKGLEW 50
>AM078972-1|CAL03118.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 85 GSIRLTHGGLGSTFAAFDIT---NAAGRGLNYRVEIWG 119
GS+RL+ G TF+AF +T A G+GL + I G
Sbjct: 19 GSLRLSCAASGFTFSAFSMTWVRQAPGKGLEWVAAISG 56
>AK129729-1|BAC85229.1| 168|Homo sapiens protein ( Homo sapiens
cDNA FLJ26218 fis, clone ADG08191. ).
Length = 168
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 52 SMVSSWAHPLTLFAPTGTRINAIRAR 77
S + SW+HPLT P G+R +I R
Sbjct: 121 STLRSWSHPLTAAQPGGSRSCSITCR 146
>AM080229-1|CAL04375.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Query: 85 GSIRLTHGGLGSTFAAFD---ITNAAGRGLNY 113
GS+RL+ G G TF+++D + A G+GL +
Sbjct: 19 GSLRLSCAGSGFTFSSYDMSWVRQAPGKGLEW 50
>AF245313-1|AAK12852.1| 140|Homo sapiens immunoglobulin heavy chain
leader and variable region protein.
Length = 140
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 56 SWAHPLTLFAPTGTRINAIRAREVGASQSGSIRLTHGGLGSTFAAFDIT---NAAGRGLN 112
SW +T+ +++ + + A GS+RL+ G TF+ +++T A G+GL
Sbjct: 6 SWVFLVTIIKGVQCQVHLVESGGDLAKPGGSLRLSCVASGFTFSDYNMTWIRQAPGKGLE 65
Query: 113 Y 113
+
Sbjct: 66 W 66
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.319 0.133 0.389
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,667,408
Number of Sequences: 224733
Number of extensions: 471704
Number of successful extensions: 1203
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1195
Number of HSP's gapped (non-prelim): 19
length of query: 120
length of database: 73,234,838
effective HSP length: 81
effective length of query: 39
effective length of database: 55,031,465
effective search space: 2146227135
effective search space used: 2146227135
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 59 (27.9 bits)
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