GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004259-TA|BGIBMGA004259-PA|undefined
         (127 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569719-1|AAS86672.1|  401|Apis mellifera complementary sex det...    23   0.80 
AY569718-1|AAS86671.1|  401|Apis mellifera complementary sex det...    23   0.80 
AY569715-1|AAS86668.1|  401|Apis mellifera complementary sex det...    23   0.80 
AY569713-1|AAS86666.1|  401|Apis mellifera complementary sex det...    23   0.80 
AY569711-1|AAS86664.1|  401|Apis mellifera complementary sex det...    23   0.80 
AY569702-1|AAS86655.1|  400|Apis mellifera complementary sex det...    23   0.80 
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    23   0.80 
AY569714-1|AAS86667.1|  401|Apis mellifera complementary sex det...    22   2.4  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    20   7.4  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    20   7.4  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              20   9.8  

>AY569719-1|AAS86672.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 23.4 bits (48), Expect = 0.80
 Identities = 7/18 (38%), Positives = 14/18 (77%)

Query: 3   PTKPTSTNDDVNEESLSP 20
           P KPT+T+D++  + ++P
Sbjct: 137 PGKPTTTSDELKRDIINP 154


>AY569718-1|AAS86671.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 23.4 bits (48), Expect = 0.80
 Identities = 7/18 (38%), Positives = 14/18 (77%)

Query: 3   PTKPTSTNDDVNEESLSP 20
           P KPT+T+D++  + ++P
Sbjct: 137 PGKPTTTSDELKRDIINP 154


>AY569715-1|AAS86668.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 23.4 bits (48), Expect = 0.80
 Identities = 7/18 (38%), Positives = 14/18 (77%)

Query: 3   PTKPTSTNDDVNEESLSP 20
           P KPT+T+D++  + ++P
Sbjct: 137 PGKPTTTSDELKRDIINP 154


>AY569713-1|AAS86666.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 23.4 bits (48), Expect = 0.80
 Identities = 7/18 (38%), Positives = 14/18 (77%)

Query: 3   PTKPTSTNDDVNEESLSP 20
           P KPT+T+D++  + ++P
Sbjct: 137 PGKPTTTSDELKRDIINP 154


>AY569711-1|AAS86664.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 23.4 bits (48), Expect = 0.80
 Identities = 7/18 (38%), Positives = 14/18 (77%)

Query: 3   PTKPTSTNDDVNEESLSP 20
           P KPT+T+D++  + ++P
Sbjct: 137 PGKPTTTSDELKRDIINP 154


>AY569702-1|AAS86655.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 23.4 bits (48), Expect = 0.80
 Identities = 7/18 (38%), Positives = 14/18 (77%)

Query: 3   PTKPTSTNDDVNEESLSP 20
           P KPT+T+D++  + ++P
Sbjct: 137 PGKPTTTSDELKRDIINP 154


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 23.4 bits (48), Expect = 0.80
 Identities = 7/18 (38%), Positives = 14/18 (77%)

Query: 3   PTKPTSTNDDVNEESLSP 20
           P KPT+T+D++  + ++P
Sbjct: 137 PGKPTTTSDELKRDIINP 154


>AY569714-1|AAS86667.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 7/18 (38%), Positives = 13/18 (72%)

Query: 3   PTKPTSTNDDVNEESLSP 20
           P KPT+T+D++    ++P
Sbjct: 137 PGKPTTTSDELKRGIINP 154


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query: 53  MRLLVEALTNPPNLENENIT 72
           + +L+E   NP  LEN  +T
Sbjct: 271 INMLMELQKNPQKLENIKLT 290


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 9/34 (26%), Positives = 18/34 (52%)

Query: 37  TANDGWRALFEAQQTSMRLLVEALTNPPNLENEN 70
           T+ +  R   E +++  R ++ +L+N  N  N N
Sbjct: 295 TSKERSRDRTERERSKERKIISSLSNNYNYNNNN 328


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 7/21 (33%), Positives = 13/21 (61%)

Query: 51 TSMRLLVEALTNPPNLENENI 71
          TS +++ E      N+E+EN+
Sbjct: 39 TSQKIIDEVYNGNVNVEDENV 59


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.308    0.125    0.353 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,327
Number of Sequences: 429
Number of extensions: 1074
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of query: 127
length of database: 140,377
effective HSP length: 51
effective length of query: 76
effective length of database: 118,498
effective search space:  9005848
effective search space used:  9005848
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.4 bits)
S2: 39 (19.8 bits)