Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA004253-TA|BGIBMGA004253-PA|undefined
(197 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 23 1.5
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 2.6
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 22 4.5
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 22 4.5
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 22 4.5
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 22 4.5
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 22 4.5
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 22 4.5
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 22 4.5
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 22 4.5
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 22 4.5
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 4.5
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 4.5
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 21 5.9
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.4 bits (48), Expect = 1.5
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 118 HDNMNYENYTKWLRSELI 135
H+N NY+NY K L +I
Sbjct: 324 HNNNNYKNYNKKLYYNII 341
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 22.6 bits (46), Expect = 2.6
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 11 WQIVAGANEESITSGSRLYDCDETMLEELYKFFS 44
WQ+ A ++ GS + C L+EL + S
Sbjct: 908 WQVTLNARLVELSLGSNPWSCRCKFLQELSSWVS 941
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 114 SGDFHDNMNYENYTKWLRSELIPNL 138
S +++ N NY NY K ++L N+
Sbjct: 89 SNNYNYNNNYNNYNKHNYNKLYYNI 113
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 114 SGDFHDNMNYENYTKWLRSELIPNL 138
S +++ N NY NY K ++L N+
Sbjct: 89 SNNYNYNNNYNNYNKHNYNKLYYNI 113
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 114 SGDFHDNMNYENYTKWLRSELIPNL 138
S +++ N NY NY K ++L N+
Sbjct: 89 SNNYNYNNNYNNYNKHNYNKLYYNI 113
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 114 SGDFHDNMNYENYTKWLRSELIPNL 138
S +++ N NY NY K ++L N+
Sbjct: 89 SNNYNYNNNYNNYNKHNYNKLYYNI 113
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 114 SGDFHDNMNYENYTKWLRSELIPNL 138
S +++ N NY NY K ++L N+
Sbjct: 89 SNNYNYNNNYNNYNKHNYNKLYYNI 113
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 114 SGDFHDNMNYENYTKWLRSELIPNL 138
S +++ N NY NY K ++L N+
Sbjct: 89 SNNYNYNNNYNNYNKHNYNKLYYNI 113
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 114 SGDFHDNMNYENYTKWLRSELIPNL 138
S +++ N NY NY K ++L N+
Sbjct: 89 SNNYNYNNNYNNYNKHNYNKLYYNI 113
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 114 SGDFHDNMNYENYTKWLRSELIPNL 138
S +++ N NY NY K ++L N+
Sbjct: 89 SNNYNYNNNYNNYNKHNYNKLYYNI 113
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 114 SGDFHDNMNYENYTKWLRSELIPNL 138
S +++ N NY NY K ++L N+
Sbjct: 89 SNNYNYNNNYNNYNKHNYNKLYYNI 113
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 4.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 114 SGDFHDNMNYENYTKWLRSELIPNL 138
S +++ N NY NY K ++L N+
Sbjct: 322 SNNYNYNNNYNNYNKHNYNKLYYNI 346
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 4.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 114 SGDFHDNMNYENYTKWLRSELIPNL 138
S +++ N NY NY K ++L N+
Sbjct: 322 SNNYNYNNNYNNYNKHNYNKLYYNI 346
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 21.4 bits (43), Expect = 5.9
Identities = 11/45 (24%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Query: 114 SGDFHDNMNYENYTKWLRSELIPNLPPNAVLVIDNASYHNKQYDP 158
SG ++ +Y ++ ++ +PP+ + +ID Y QY P
Sbjct: 5 SGPSYEAFSYGGQARFNNQTVVDKVPPDMLHLIDANWY---QYPP 46
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.315 0.133 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,874
Number of Sequences: 429
Number of extensions: 2938
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 14
length of query: 197
length of database: 140,377
effective HSP length: 55
effective length of query: 142
effective length of database: 116,782
effective search space: 16583044
effective search space used: 16583044
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 42 (21.0 bits)
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