Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA004237-TA|BGIBMGA004237-PA|undefined
(86 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1762 - 29299328-29299437,29299782-29299871,29300487-293012... 28 1.1
07_03_0245 - 15787725-15787814,15788138-15788389 28 1.1
03_05_0822 - 27963849-27964544,27965043-27965091,27965372-279654... 27 1.4
06_01_0997 - 7752634-7753128,7753280-7753708,7754403-7755196,775... 27 2.5
01_01_0561 + 4122751-4123140,4124226-4124484,4124639-4124985 27 2.5
07_03_0860 + 22057309-22058453,22059833-22059964,22060328-220604... 26 3.3
04_01_0175 - 1972361-1972429,1973185-1973334,1974956-1975105,197... 26 3.3
03_05_0175 + 21513767-21513903,21534361-21535385,21537375-215375... 26 4.3
02_05_0496 - 29499959-29500653,29501039-29501093 26 4.3
02_02_0223 - 8021040-8021247,8022275-8022367,8022808-8023059,802... 26 4.3
01_03_0077 + 12247853-12247939,12248044-12248118,12248223-122482... 26 4.3
08_02_0329 - 15833124-15833825 25 5.7
07_03_1794 - 29580767-29584189 25 5.7
04_03_0663 - 18487295-18487795 25 5.7
02_05_1312 + 35642687-35642923,35643712-35643831,35644468-356445... 25 5.7
02_05_0945 + 32984366-32984652,32986439-32986823,32986869-32986925 25 5.7
07_03_0797 + 21575948-21576042,21576140-21576902,21577134-215773... 25 7.5
07_03_0698 - 20765305-20768526 25 7.5
01_07_0242 + 42234217-42234320,42234708-42235029,42235377-422357... 25 7.5
06_01_0293 - 2139421-2139600,2139716-2140471,2140830-2140935,214... 25 10.0
04_04_1529 + 34176547-34177215,34177280-34177320,34178777-34179053 25 10.0
03_05_0594 + 25981587-25981826,25981912-25982160,25982257-259838... 25 10.0
03_01_0602 - 4428651-4428847,4429070-4429150,4429226-4429604,443... 25 10.0
>07_03_1762 -
29299328-29299437,29299782-29299871,29300487-29301291,
29301956-29303278
Length = 775
Score = 27.9 bits (59), Expect = 1.1
Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 39 APQQKQGPKSRPP--SQRKRDQRRQDIFRENNPKTKQALQDIED 80
AP+ K+ PK +PP S+R+R + D + E + D+++
Sbjct: 95 APRPKRPPKGKPPPRSRRRRQKDDDDDYEEEEEEDADFDPDVDE 138
>07_03_0245 - 15787725-15787814,15788138-15788389
Length = 113
Score = 27.9 bits (59), Expect = 1.1
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 48 SRPPSQRKRDQRRQDIFRENNPKTKQALQDIEDK 81
+RPP +R R Q++Q I + + K + DI DK
Sbjct: 4 NRPPRRRGRKQQQQQIDTQYTRQDKPPVIDIRDK 37
>03_05_0822 -
27963849-27964544,27965043-27965091,27965372-27965480,
27965979-27966006,27966086-27966276,27966418-27966532,
27966955-27967206
Length = 479
Score = 27.5 bits (58), Expect = 1.4
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 39 APQQKQGPKSRPPSQRKRDQRRQDIFRENNPKTKQALQDIEDKI 82
A Q PK P++ +R+++ PK K+A +I DKI
Sbjct: 339 ASSSDQKPKPSKPTEEEREEKAAAAVAAEKPKKKKATNEI-DKI 381
>06_01_0997 -
7752634-7753128,7753280-7753708,7754403-7755196,
7755247-7755574
Length = 681
Score = 26.6 bits (56), Expect = 2.5
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 40 PQQKQGPKSRPPSQRKRDQRRQ 61
P++K G PP +RKR + RQ
Sbjct: 171 PEEKTGEACPPPKKRKRSRTRQ 192
>01_01_0561 + 4122751-4123140,4124226-4124484,4124639-4124985
Length = 331
Score = 26.6 bits (56), Expect = 2.5
Identities = 10/39 (25%), Positives = 24/39 (61%)
Query: 42 QKQGPKSRPPSQRKRDQRRQDIFRENNPKTKQALQDIED 80
+K+ + PS +++ Q+++++F P T ++ D+ED
Sbjct: 48 RKREQQGAQPSSQQQQQQQKEVFWAPAPLTTKSWADVED 86
>07_03_0860 +
22057309-22058453,22059833-22059964,22060328-22060412,
22061666-22061867,22062273-22062344,22062509-22062573,
22062682-22062741,22063033-22064379,22064463-22064607,
22064688-22067442,22068540-22068630,22068655-22068873
Length = 2105
Score = 26.2 bits (55), Expect = 3.3
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 4/28 (14%)
Query: 41 QQKQGPKSRPPSQRKRDQRRQDIFRENN 68
QQKQ P+S+PP Q Q R+D+ N+
Sbjct: 616 QQKQQPQSQPPLQ----QTRKDVVSSNH 639
>04_01_0175 -
1972361-1972429,1973185-1973334,1974956-1975105,
1975370-1975417,1975717-1975793,1975897-1975999,
1977103-1977233,1978793-1978970,1980656-1980676,
1981233-1981290,1981381-1981444,1982261-1982431,
1982526-1982637,1982779-1983021,1983783-1983964,
1984785-1984920
Length = 630
Score = 26.2 bits (55), Expect = 3.3
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
Query: 53 QRKRDQRRQDIFRENNPKTKQALQDIEDKISLRE 86
+R R +RR R+NNP Q +DKISL++
Sbjct: 76 ERSRTERR----RQNNPADDPTKQLFDDKISLKK 105
>03_05_0175 +
21513767-21513903,21534361-21535385,21537375-21537547,
21537849-21538679
Length = 721
Score = 25.8 bits (54), Expect = 4.3
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Query: 38 VAPQQKQGPKSRPPSQRKRDQRRQDIFRENNPKTKQALQDIEDKISLRE 86
+ PQ K+G + P Q+K+ Q N P+ +Q Q + +I +E
Sbjct: 541 IKPQGKKGQQQTKPEQKKQQQ-----LNTNKPQEQQQQQQQKQQIKPQE 584
>02_05_0496 - 29499959-29500653,29501039-29501093
Length = 249
Score = 25.8 bits (54), Expect = 4.3
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 45 GPKSRPPSQRKRDQRRQDIFRENNPKTKQA 74
GP+ PP Q+++ Q++Q ++ T+QA
Sbjct: 137 GPEPPPPEQQQQQQQQQQPPQQQEQTTQQA 166
>02_02_0223 -
8021040-8021247,8022275-8022367,8022808-8023059,
8023143-8023597,8023667-8023983,8024019-8024298,
8024423-8024728,8024762-8025130,8025216-8025455
Length = 839
Score = 25.8 bits (54), Expect = 4.3
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 38 VAPQQKQGPKSRPPSQRKRDQRRQDIFRENNPKTKQALQ 76
V P+ G SRPP ++ D+ + ++ NP + L+
Sbjct: 432 VVPKPGLGKPSRPPKRKVTDKAEEPEMQKENPVLEVPLE 470
>01_03_0077 +
12247853-12247939,12248044-12248118,12248223-12248280,
12250039-12250094,12251029-12251091,12251248-12251310,
12251470-12251700
Length = 210
Score = 25.8 bits (54), Expect = 4.3
Identities = 13/48 (27%), Positives = 25/48 (52%)
Query: 39 APQQKQGPKSRPPSQRKRDQRRQDIFRENNPKTKQALQDIEDKISLRE 86
AP + +S+P ++R + +++ P+ K+A D EDK +E
Sbjct: 127 APTVSRPEESKPKAKRSQPALLKNVIISVKPQAKKAKLDGEDKPPAKE 174
>08_02_0329 - 15833124-15833825
Length = 233
Score = 25.4 bits (53), Expect = 5.7
Identities = 9/27 (33%), Positives = 18/27 (66%)
Query: 46 PKSRPPSQRKRDQRRQDIFRENNPKTK 72
P + Q+++ Q++QD+ ++NN K K
Sbjct: 33 PNTSNQQQQQQQQQQQDLSKKNNKKKK 59
>07_03_1794 - 29580767-29584189
Length = 1140
Score = 25.4 bits (53), Expect = 5.7
Identities = 9/22 (40%), Positives = 16/22 (72%)
Query: 65 RENNPKTKQALQDIEDKISLRE 86
+E+N K L D++D+I+LR+
Sbjct: 313 KEDNDSLKDRLDDLQDEIALRD 334
>04_03_0663 - 18487295-18487795
Length = 166
Score = 25.4 bits (53), Expect = 5.7
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 46 PKSRPPSQRKRDQRRQDIFRENNPKTKQALQDI 78
P S+PP+Q K +Q + EN ++ Q +Q +
Sbjct: 57 PASKPPTQIKPNQTKIKQQEENQKQSSQRIQKL 89
>02_05_1312 +
35642687-35642923,35643712-35643831,35644468-35644534,
35644673-35644694,35645053-35645152,35645282-35645414,
35645483-35645517,35645708-35646409,35646789-35647121,
35647337-35647601,35647665-35647999,35648105-35648177,
35648271-35648356,35648479-35648598,35648674-35648741,
35648825-35648882
Length = 917
Score = 25.4 bits (53), Expect = 5.7
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 40 PQQKQGPKSRPPSQRKRDQRRQDIFRENNPKTKQALQDIEDKISLRE 86
P+++ K R P ++K DQ R N K + + DK+S E
Sbjct: 94 PKRRDAGKKRGPRKKKVDQENIKTHRHNANAVKGKML-VNDKVSKTE 139
>02_05_0945 + 32984366-32984652,32986439-32986823,32986869-32986925
Length = 242
Score = 25.4 bits (53), Expect = 5.7
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 39 APQQKQGPKSRPPSQRKRDQRRQDIFRENNPKTKQALQDIEDKIS 83
+P +K PK PS RKR F+ P+ K+ + + IS
Sbjct: 120 SPPEKSLPKPENPSPRKRKGLLPFSFKWGKPQNKEVFPEDDVIIS 164
>07_03_0797 +
21575948-21576042,21576140-21576902,21577134-21577327,
21577667-21577700,21578421-21578485,21579032-21579524
Length = 547
Score = 25.0 bits (52), Expect = 7.5
Identities = 10/41 (24%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 40 PQQKQGPKSRPPSQRKRDQRRQDIFRENNPK-TKQALQDIE 79
P +GP++ +RD R D++R + ++ +D+E
Sbjct: 412 PAGSRGPRNADKKDYRRDTDRSDVYRPTRREDNRRVARDVE 452
>07_03_0698 - 20765305-20768526
Length = 1073
Score = 25.0 bits (52), Expect = 7.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 49 RPPSQRKRDQRRQDIFRENNPKTKQALQD 77
R S R R+QRR + NNP + L+D
Sbjct: 144 RDASVRPRNQRRTNAGSWNNPSRRAILED 172
>01_07_0242 +
42234217-42234320,42234708-42235029,42235377-42235778,
42235921-42236265,42236785-42236854,42237098-42237173,
42237309-42237459
Length = 489
Score = 25.0 bits (52), Expect = 7.5
Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Query: 38 VAPQQKQG--PKSRPPSQRKRDQRRQDIFRENNPK 70
V P +K+G K R QRKR+++++ +N+P+
Sbjct: 82 VEPSKKRGYLTKKRLKLQRKREKKKRKEANKNDPR 116
>06_01_0293 -
2139421-2139600,2139716-2140471,2140830-2140935,
2140999-2141249,2141342-2141443,2141557-2141876,
2142350-2142546,2143668-2143786,2143876-2143997,
2144877-2145081
Length = 785
Score = 24.6 bits (51), Expect = 10.0
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 53 QRKRDQRRQDIFRENNPKTKQALQDIEDKISLRE 86
Q+ + +++ N K +QDIED+I L+E
Sbjct: 339 QKLNELAQKESLDANQKLHKLGIQDIEDEIKLKE 372
>04_04_1529 + 34176547-34177215,34177280-34177320,34178777-34179053
Length = 328
Score = 24.6 bits (51), Expect = 10.0
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 45 GPKSRPPSQRKRDQRRQDIFRENNPKTKQALQDIE 79
GP RPP +R+ +R E+ TK+A +E
Sbjct: 119 GPPRRPPRRRRGGKRGGGDCEEDASATKEADASVE 153
>03_05_0594 +
25981587-25981826,25981912-25982160,25982257-25983818,
25984139-25984390,25984471-25984581,25984669-25984729,
25984829-25984921,25984999-25985184
Length = 917
Score = 24.6 bits (51), Expect = 10.0
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 38 VAPQQKQGPKSRPPSQRKRDQRRQDIFRENNPKTK 72
V P+ G RPP ++ DQ + ++ NP K
Sbjct: 510 VVPKPGLGKPPRPPKRKVTDQAEELEMQKENPVLK 544
>03_01_0602 -
4428651-4428847,4429070-4429150,4429226-4429604,
4430084-4430216,4430298-4430404,4430490-4430761,
4431581-4431755
Length = 447
Score = 24.6 bits (51), Expect = 10.0
Identities = 9/16 (56%), Positives = 13/16 (81%)
Query: 46 PKSRPPSQRKRDQRRQ 61
P SRPPS R+R +R++
Sbjct: 71 PLSRPPSSRRRRRRKR 86
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.313 0.129 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,829,405
Number of Sequences: 37544
Number of extensions: 50367
Number of successful extensions: 189
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 168
Number of HSP's gapped (non-prelim): 24
length of query: 86
length of database: 14,793,348
effective HSP length: 65
effective length of query: 21
effective length of database: 12,352,988
effective search space: 259412748
effective search space used: 259412748
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 51 (24.6 bits)
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