GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004232-TA|BGIBMGA004232-PA|undefined
         (92 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC018914-1|AAH18914.1|  263|Homo sapiens NECAP endocytosis assoc...    27   6.9  
BC017014-1|AAH17014.1|  263|Homo sapiens NECAP endocytosis assoc...    27   6.9  
AL669962-1|CAH71454.1|  263|Homo sapiens novel protein protein.        27   6.9  
AL137802-1|CAI22843.1|  263|Homo sapiens novel protein protein.        27   6.9  
AK223344-1|BAD97064.1|  263|Homo sapiens hypothetical protein FL...    27   6.9  
AK023545-1|BAB14605.1|  273|Homo sapiens protein ( Homo sapiens ...    27   6.9  
AK001282-1|BAA91598.1|  263|Homo sapiens protein ( Homo sapiens ...    27   6.9  

>BC018914-1|AAH18914.1|  263|Homo sapiens NECAP endocytosis
           associated 2 protein.
          Length = 263

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 2/40 (5%)

Query: 14  PDSVKSLETRFKDGMKLKCSVADIKTAYRLGKVSNDKPRP 53
           PD    L+  FK+G  +K ++A++K   + G   N + RP
Sbjct: 142 PDQGPKLDLGFKEGQTIKLNIANMKK--KEGAAGNPRVRP 179


>BC017014-1|AAH17014.1|  263|Homo sapiens NECAP endocytosis
           associated 2 protein.
          Length = 263

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 2/40 (5%)

Query: 14  PDSVKSLETRFKDGMKLKCSVADIKTAYRLGKVSNDKPRP 53
           PD    L+  FK+G  +K ++A++K   + G   N + RP
Sbjct: 142 PDQGPKLDLGFKEGQTIKLNIANMKK--KEGAAGNPRVRP 179


>AL669962-1|CAH71454.1|  263|Homo sapiens novel protein protein.
          Length = 263

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 2/40 (5%)

Query: 14  PDSVKSLETRFKDGMKLKCSVADIKTAYRLGKVSNDKPRP 53
           PD    L+  FK+G  +K ++A++K   + G   N + RP
Sbjct: 142 PDQGPKLDLGFKEGQTIKLNIANMKK--KEGAAGNPRVRP 179


>AL137802-1|CAI22843.1|  263|Homo sapiens novel protein protein.
          Length = 263

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 2/40 (5%)

Query: 14  PDSVKSLETRFKDGMKLKCSVADIKTAYRLGKVSNDKPRP 53
           PD    L+  FK+G  +K ++A++K   + G   N + RP
Sbjct: 142 PDQGPKLDLGFKEGQTIKLNIANMKK--KEGAAGNPRVRP 179


>AK223344-1|BAD97064.1|  263|Homo sapiens hypothetical protein
           FLJ10420 variant protein.
          Length = 263

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 2/40 (5%)

Query: 14  PDSVKSLETRFKDGMKLKCSVADIKTAYRLGKVSNDKPRP 53
           PD    L+  FK+G  +K ++A++K   + G   N + RP
Sbjct: 142 PDQGPKLDLGFKEGQTIKLNIANMKK--KEGAAGNPRVRP 179


>AK023545-1|BAB14605.1|  273|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13483 fis, clone PLACE1003886. ).
          Length = 273

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 2/40 (5%)

Query: 14  PDSVKSLETRFKDGMKLKCSVADIKTAYRLGKVSNDKPRP 53
           PD    L+  FK+G  +K ++A++K   + G   N + RP
Sbjct: 142 PDQGPKLDLGFKEGQTIKLNIANMKK--KEGAAGNPRVRP 179


>AK001282-1|BAA91598.1|  263|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10420 fis, clone NT2RP1000170. ).
          Length = 263

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 2/40 (5%)

Query: 14  PDSVKSLETRFKDGMKLKCSVADIKTAYRLGKVSNDKPRP 53
           PD    L+  FK+G  +K ++A++K   + G   N + RP
Sbjct: 142 PDQGPKLDLGFKEGQTIKLNIANMKK--KEGAAGNPRVRP 179


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.319    0.132    0.393 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,635,799
Number of Sequences: 224733
Number of extensions: 307982
Number of successful extensions: 398
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 398
Number of HSP's gapped (non-prelim): 7
length of query: 92
length of database: 73,234,838
effective HSP length: 70
effective length of query: 22
effective length of database: 57,503,528
effective search space: 1265077616
effective search space used: 1265077616
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 57 (27.1 bits)