GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004225-TA|BGIBMGA004225-PA|IPR008037|Proteinase
inhibitor I19, pacifastin, IPR009041|Proteinase inhibitor, PMP and
SGCI
         (283 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    27   0.19 
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    27   0.25 
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    21   9.4  

>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
           protein-1 protein.
          Length = 128

 Score = 27.1 bits (57), Expect = 0.19
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 4/45 (8%)

Query: 106 ICQPGVLYNRGCQRCI-CGENKMAVCTNRNNACKPNLESQNILNL 149
           IC  G+  +  C +CI C   K   C+  +N C P+  S   LN+
Sbjct: 78  ICAEGMQCS--CNKCIGCSAEKFE-CSKTSNPCLPHRNSDRDLNI 119


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 26.6 bits (56), Expect = 0.25
 Identities = 11/33 (33%), Positives = 17/33 (51%)

Query: 186 ACVCLASGNLLCDKLLCLSYSEMHRIDARKLSG 218
           +C C     LL D L+C+    +H ID  + +G
Sbjct: 61  SCACPDGLKLLSDGLMCVEKDSIHSIDGDEENG 93



 Score = 25.8 bits (54), Expect = 0.44
 Identities = 10/29 (34%), Positives = 16/29 (55%)

Query: 50 CYCKDDFGLMCTKLLCLEQSHIDEIYGEK 78
          C C D   L+   L+C+E+  I  I G++
Sbjct: 62 CACPDGLKLLSDGLMCVEKDSIHSIDGDE 90


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)

Query: 72  DEIYGEKRAHTLRAGKRM 89
           DE+  EK AH L +G ++
Sbjct: 105 DELIAEKVAHALESGLKV 122


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.321    0.136    0.438 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,998
Number of Sequences: 429
Number of extensions: 3985
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 4
length of query: 283
length of database: 140,377
effective HSP length: 57
effective length of query: 226
effective length of database: 115,924
effective search space: 26198824
effective search space used: 26198824
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 43 (21.4 bits)