GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004221-TA|BGIBMGA004221-PA|IPR001672|Phosphoglucose
isomerase (PGI)
         (528 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   4.7  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   8.3  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 12/29 (41%), Positives = 17/29 (58%)

Query: 70   EDRAVLHIALRNRQNKPILVNGKDVSTDV 98
            E RA LH ALR R  + I+V  ++   +V
Sbjct: 1144 EFRAALHEALRGRTAQLIIVQAENAYPEV 1172


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.6 bits (46), Expect = 8.3
 Identities = 10/18 (55%), Positives = 12/18 (66%)

Query: 343 GAEVEYSTGPIVWGEPGT 360
           GAE+E ST  I +G P T
Sbjct: 309 GAEIEPSTQTIDFGRPAT 326


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.135    0.403 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,998
Number of Sequences: 429
Number of extensions: 5980
Number of successful extensions: 10
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 2
length of query: 528
length of database: 140,377
effective HSP length: 61
effective length of query: 467
effective length of database: 114,208
effective search space: 53335136
effective search space used: 53335136
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 46 (22.6 bits)