GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004218-TA|BGIBMGA004218-PA|IPR001173|Glycosyl
transferase, family 2
         (247 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex det...    22   6.0  
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    21   7.9  
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    21   7.9  
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    21   7.9  

>AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 45  EVIIIDDGSPDGTSEVARQLQKL 67
           + II+ D  P+G    A +LQK+
Sbjct: 98  KTIILSDKGPEGIQINATELQKI 120


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/23 (34%), Positives = 14/23 (60%)

Query: 45  EVIIIDDGSPDGTSEVARQLQKL 67
           + +I+ D  P+G    A +LQK+
Sbjct: 98  KTVILSDKGPEGIQINATELQKI 120


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/23 (34%), Positives = 14/23 (60%)

Query: 45  EVIIIDDGSPDGTSEVARQLQKL 67
           + +I+ D  P+G    A +LQK+
Sbjct: 98  KTVILSDKGPEGIQINATELQKI 120


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/23 (34%), Positives = 14/23 (60%)

Query: 45  EVIIIDDGSPDGTSEVARQLQKL 67
           + +I+ D  P+G    A +LQK+
Sbjct: 98  KTVILSDKGPEGIQINATELQKI 120


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.322    0.142    0.411 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,003
Number of Sequences: 429
Number of extensions: 2875
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 4
length of query: 247
length of database: 140,377
effective HSP length: 56
effective length of query: 191
effective length of database: 116,353
effective search space: 22223423
effective search space used: 22223423
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 43 (21.4 bits)