GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004197-TA|BGIBMGA004197-PA|undefined
         (891 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    24   4.7  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    24   6.3  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    24   6.3  
DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex det...    24   6.3  
DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex det...    24   6.3  
DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex det...    24   6.3  
DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex det...    24   6.3  
AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex det...    24   6.3  
AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex det...    24   6.3  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    24   6.3  
AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex det...    24   6.3  
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    24   6.3  
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    24   6.3  

>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)

Query: 838 TGSGSGSKRRRCVCCQVAG-RKKFVAQMC 865
           +GS      R C+CCQ +G R+  V+  C
Sbjct: 64  SGSKIWQMERSCMCCQESGEREASVSLFC 92


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 11/48 (22%), Positives = 22/48 (45%)

Query: 163 DRRRKRSRKQLXXXXXXXXXXEKNKNRTTMQTISDPKCDLEESNNLSH 210
           +R +K  + +           E++++RT  +T  +PK     SNN  +
Sbjct: 44  EREQKSYKNEREYRKYRETSKERSQDRTERETSKEPKIISSLSNNYKY 91


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 11/48 (22%), Positives = 22/48 (45%)

Query: 163 DRRRKRSRKQLXXXXXXXXXXEKNKNRTTMQTISDPKCDLEESNNLSH 210
           +R +K  + +           E++++RT  +T  +PK     SNN  +
Sbjct: 44  EREQKSYKNEREYRKYRETSKERSQDRTERETSKEPKIISSLSNNYKY 91


>DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 11/48 (22%), Positives = 22/48 (45%)

Query: 163 DRRRKRSRKQLXXXXXXXXXXEKNKNRTTMQTISDPKCDLEESNNLSH 210
           +R +K  + +           E+++NRT  +   +PK     SNN ++
Sbjct: 44  EREQKLYKNEREYRKYGETSKERSRNRTEREKSKEPKIISSLSNNYNY 91


>DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 11/48 (22%), Positives = 22/48 (45%)

Query: 163 DRRRKRSRKQLXXXXXXXXXXEKNKNRTTMQTISDPKCDLEESNNLSH 210
           +R +K  + +           E+++NRT  +   +PK     SNN ++
Sbjct: 44  EREQKLYKNEREYRKYGETSKERSRNRTEREKSKEPKIISSLSNNYNY 91


>DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 11/48 (22%), Positives = 22/48 (45%)

Query: 163 DRRRKRSRKQLXXXXXXXXXXEKNKNRTTMQTISDPKCDLEESNNLSH 210
           +R +K  + +           E+++NRT  +   +PK     SNN ++
Sbjct: 44  EREQKLYKNEREYRKYGETSKERSRNRTEREKSKEPKIISSLSNNYNY 91


>DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 11/48 (22%), Positives = 22/48 (45%)

Query: 163 DRRRKRSRKQLXXXXXXXXXXEKNKNRTTMQTISDPKCDLEESNNLSH 210
           +R +K  + +           E+++NRT  +   +PK     SNN ++
Sbjct: 44  EREQKLYKNEREYRKYGETSKERSRNRTEREKSKEPKIISSLSNNYNY 91


>AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 11/48 (22%), Positives = 22/48 (45%)

Query: 163 DRRRKRSRKQLXXXXXXXXXXEKNKNRTTMQTISDPKCDLEESNNLSH 210
           +R +K  + +           E+++NRT  +   +PK     SNN ++
Sbjct: 277 EREQKLYKNEREYRKYGETSKERSRNRTEREKSKEPKIISSLSNNYNY 324


>AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 11/48 (22%), Positives = 22/48 (45%)

Query: 163 DRRRKRSRKQLXXXXXXXXXXEKNKNRTTMQTISDPKCDLEESNNLSH 210
           +R +K  + +           E+++NRT  +   +PK     SNN ++
Sbjct: 277 EREQKLYKNEREYRKYGETSKERSRNRTEREKSKEPKIISSLSNNYNY 324


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 11/48 (22%), Positives = 22/48 (45%)

Query: 163 DRRRKRSRKQLXXXXXXXXXXEKNKNRTTMQTISDPKCDLEESNNLSH 210
           +R +K  + +           E+++NRT  +   +PK     SNN ++
Sbjct: 277 EREQKLYKNEREYRKYGETSKERSRNRTEREKSKEPKIISSLSNNYNY 324


>AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 11/48 (22%), Positives = 22/48 (45%)

Query: 163 DRRRKRSRKQLXXXXXXXXXXEKNKNRTTMQTISDPKCDLEESNNLSH 210
           +R +K  + +           E+++NRT  +   +PK     SNN ++
Sbjct: 277 EREQKLYKNEREYRKYGETSKERSRNRTEREKSKEPKIISSLSNNYNY 324


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 11/48 (22%), Positives = 22/48 (45%)

Query: 163 DRRRKRSRKQLXXXXXXXXXXEKNKNRTTMQTISDPKCDLEESNNLSH 210
           +R +K  + +           E+++NRT  +   +PK     SNN ++
Sbjct: 277 EREQKLYKNEREYRKYGETSKERSRNRTEREKSKEPKIISSLSNNYNY 324


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 11/48 (22%), Positives = 22/48 (45%)

Query: 163 DRRRKRSRKQLXXXXXXXXXXEKNKNRTTMQTISDPKCDLEESNNLSH 210
           +R +K  + +           E+++NRT  +   +PK     SNN ++
Sbjct: 266 EREQKLYKNEREYRKYGETSKERSRNRTEREKSKEPKIISSLSNNYNY 313


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.317    0.132    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 264,968
Number of Sequences: 429
Number of extensions: 12557
Number of successful extensions: 49
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 36
Number of HSP's gapped (non-prelim): 13
length of query: 891
length of database: 140,377
effective HSP length: 64
effective length of query: 827
effective length of database: 112,921
effective search space: 93385667
effective search space used: 93385667
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 48 (23.4 bits)