GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004192-TA|BGIBMGA004192-PA|undefined
         (182 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    23   2.3  
DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    21   5.4  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    21   5.4  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    21   5.4  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    21   5.4  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    21   5.4  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    21   5.4  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    21   5.4  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    21   5.4  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   7.1  

>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 15/53 (28%), Positives = 23/53 (43%)

Query: 52  FNNRGHYGDAGAAGSQYTRAWPNSLYNETYGSELGPGPAEGGADRRYVAGQHN 104
           FN+   YG +G       RA  +++     G  +G G +  G DR  +  Q N
Sbjct: 238 FNSGSTYGVSGQRWQYAARAAISTMLASMGGGLVGLGFSLNGPDRIDILSQIN 290


>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/27 (29%), Positives = 14/27 (51%)

Query: 153 NQYPATGYSYYSAQYNDQLPYLRFVSI 179
           N Y  + Y+ Y+  YN     L++ +I
Sbjct: 87  NNYKYSNYNNYNNNYNTNYKKLQYYNI 113


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/27 (29%), Positives = 14/27 (51%)

Query: 153 NQYPATGYSYYSAQYNDQLPYLRFVSI 179
           N Y  + Y+ Y+  YN     L++ +I
Sbjct: 87  NNYKYSNYNNYNNNYNTNYKKLQYYNI 113


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/27 (29%), Positives = 14/27 (51%)

Query: 153 NQYPATGYSYYSAQYNDQLPYLRFVSI 179
           N Y  + Y+ Y+  YN     L++ +I
Sbjct: 87  NNYKYSNYNNYNNNYNTNYKKLQYYNI 113


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/27 (29%), Positives = 14/27 (51%)

Query: 153 NQYPATGYSYYSAQYNDQLPYLRFVSI 179
           N Y  + Y+ Y+  YN     L++ +I
Sbjct: 87  NNYKYSNYNNYNNNYNTNYKKLQYYNI 113


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/27 (29%), Positives = 14/27 (51%)

Query: 153 NQYPATGYSYYSAQYNDQLPYLRFVSI 179
           N Y  + Y+ Y+  YN     L++ +I
Sbjct: 87  NNYKYSNYNNYNNNYNTNYKKLQYYNI 113


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/27 (29%), Positives = 14/27 (51%)

Query: 153 NQYPATGYSYYSAQYNDQLPYLRFVSI 179
           N Y  + Y+ Y+  YN     L++ +I
Sbjct: 87  NNYKYSNYNNYNNNYNTNYKKLQYYNI 113


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/27 (29%), Positives = 14/27 (51%)

Query: 153 NQYPATGYSYYSAQYNDQLPYLRFVSI 179
           N Y  + Y+ Y+  YN     L++ +I
Sbjct: 87  NNYKYSNYNNYNNNYNTNYKKLQYYNI 113


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/36 (22%), Positives = 17/36 (47%)

Query: 98  YVAGQHNQLDQPDWWYDHTKVVTRMFNFDEKYPFWM 133
           ++ G  N LD   ++YD++     + +     P W+
Sbjct: 17  FIEGMTNVLDFDYYFYDYSNRTQALESIIANIPTWL 52


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 8/25 (32%), Positives = 13/25 (52%)

Query: 39  IPQYRPPHYGRGQFNNRGHYGDAGA 63
           +P     H   G+ N+RGH G + +
Sbjct: 379 MPSGSSVHSDSGENNSRGHSGQSSS 403


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.318    0.136    0.451 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,099
Number of Sequences: 429
Number of extensions: 3847
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of query: 182
length of database: 140,377
effective HSP length: 54
effective length of query: 128
effective length of database: 117,211
effective search space: 15003008
effective search space used: 15003008
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 41 (20.6 bits)