Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA004190-TA|BGIBMGA004190-PA|undefined
(95 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ435334-1|ABD92649.1| 135|Apis mellifera OBP17 protein. 21 2.0
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 2.6
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 2.6
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 2.6
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 2.6
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 2.6
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 2.6
DQ435338-1|ABD92653.1| 135|Apis mellifera OBP21 protein. 21 2.6
DQ435333-1|ABD92648.1| 135|Apis mellifera OBP16 protein. 21 2.6
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 2.6
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 2.6
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 21 3.4
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 3.4
>DQ435334-1|ABD92649.1| 135|Apis mellifera OBP17 protein.
Length = 135
Score = 21.4 bits (43), Expect = 2.0
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 65 GTEEKGAEPILVGKVDIDDETMPL 88
GT ++ + I GK+++DDE + L
Sbjct: 38 GTAQQIIDDINEGKINMDDENVLL 61
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.0 bits (42), Expect = 2.6
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 67 EEKGAEPILVGKVDIDDE 84
+EK ++ +L +DIDD+
Sbjct: 334 QEKSSKSLLANVLDIDDD 351
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.0 bits (42), Expect = 2.6
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 67 EEKGAEPILVGKVDIDDE 84
+EK ++ +L +DIDD+
Sbjct: 334 QEKSSKSLLANVLDIDDD 351
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.0 bits (42), Expect = 2.6
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 67 EEKGAEPILVGKVDIDDE 84
+EK ++ +L +DIDD+
Sbjct: 334 QEKSSKSLLANVLDIDDD 351
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.0 bits (42), Expect = 2.6
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 67 EEKGAEPILVGKVDIDDE 84
+EK ++ +L +DIDD+
Sbjct: 334 QEKSSKSLLANVLDIDDD 351
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.0 bits (42), Expect = 2.6
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 67 EEKGAEPILVGKVDIDDE 84
+EK ++ +L +DIDD+
Sbjct: 334 QEKSSKSLLANVLDIDDD 351
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.0 bits (42), Expect = 2.6
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 67 EEKGAEPILVGKVDIDDE 84
+EK ++ +L +DIDD+
Sbjct: 334 QEKSSKSLLANVLDIDDD 351
>DQ435338-1|ABD92653.1| 135|Apis mellifera OBP21 protein.
Length = 135
Score = 21.0 bits (42), Expect = 2.6
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 63 DQGTEEKGAEPILVGKVDIDDETMPL 88
D G +EK + G +D+++E + L
Sbjct: 36 DSGIDEKKEDDFRNGIIDVENEKVQL 61
>DQ435333-1|ABD92648.1| 135|Apis mellifera OBP16 protein.
Length = 135
Score = 21.0 bits (42), Expect = 2.6
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 63 DQGTEEKGAEPILVGKVDIDDETM 86
+ GT +K + + G V+++DE +
Sbjct: 36 ETGTSQKIIDEVYNGNVNVEDENV 59
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.0 bits (42), Expect = 2.6
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 67 EEKGAEPILVGKVDIDDE 84
+EK ++ +L +DIDD+
Sbjct: 402 QEKSSKSLLANVLDIDDD 419
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.0 bits (42), Expect = 2.6
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 67 EEKGAEPILVGKVDIDDE 84
+EK ++ +L +DIDD+
Sbjct: 402 QEKSSKSLLANVLDIDDD 419
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 20.6 bits (41), Expect = 3.4
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 78 KVDIDDETMPLKRDKKS 94
+VDI D PL KKS
Sbjct: 865 QVDIADSQQPLNLSKKS 881
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 20.6 bits (41), Expect = 3.4
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 55 EKRELPYDDQGTEEKGAEPILVGKVDIDDETMPLKRDK 92
E+ E D +G E AE L D D PL+R+K
Sbjct: 284 EENEEEEDGRGQSE--AEKRLKLDEDADGAVSPLRREK 319
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.321 0.139 0.412
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,187
Number of Sequences: 429
Number of extensions: 844
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of query: 95
length of database: 140,377
effective HSP length: 49
effective length of query: 46
effective length of database: 119,356
effective search space: 5490376
effective search space used: 5490376
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.5 bits)
S2: 38 (19.4 bits)
- SilkBase 1999-2023 -