GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004184-TA|BGIBMGA004184-PA|undefined
         (75 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    20   3.8  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    20   3.8  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 19.8 bits (39), Expect = 3.8
 Identities = 7/17 (41%), Positives = 12/17 (70%)

Query: 6   RSLPLLQLAGLNPCYIS 22
           R L ++ LAG+  CY++
Sbjct: 551 RELTIILLAGVLVCYLN 567


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 19.8 bits (39), Expect = 3.8
 Identities = 7/17 (41%), Positives = 12/17 (70%)

Query: 6   RSLPLLQLAGLNPCYIS 22
           R L ++ LAG+  CY++
Sbjct: 641 RELTIILLAGVLVCYLN 657


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.139    0.413 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,501
Number of Sequences: 429
Number of extensions: 366
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 75
length of database: 140,377
effective HSP length: 46
effective length of query: 29
effective length of database: 120,643
effective search space:  3498647
effective search space used:  3498647
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.5 bits)
S2: 36 (18.6 bits)