GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004181-TA|BGIBMGA004181-PA|undefined
         (194 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    21   7.8  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    21   7.8  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    21   7.8  
AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding prote...    21   7.8  
AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-bind...    21   7.8  

>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 10/30 (33%), Positives = 15/30 (50%)

Query: 148 REAGEDEQTSLGHSLLSVFVLIDLEGCDQG 177
           +  GE E T LG+ L  +F    + G  +G
Sbjct: 149 KAGGEREFTGLGNCLTKIFKADGITGLYRG 178


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 17/80 (21%), Positives = 30/80 (37%)

Query: 46  SILAPLKEAEIFQRSKGKLILNDEFYAKLPEVYVSGQHSTQEKNVYDNLEVLSKNRHAQN 105
           S+LA + + E    +    +LN+ +    P  +  G   +       +    +   H Q+
Sbjct: 385 SLLANVLDLEDNALASHNNLLNNVYSTPGPHHHTMGHGHSHIHATPHHHHSHAATPHHQH 444

Query: 106 GADLEHSSYLVRTVMGRICH 125
              L HSSY     +G   H
Sbjct: 445 STPLAHSSYPAAIQIGHTPH 464


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 10/30 (33%), Positives = 15/30 (50%)

Query: 148 REAGEDEQTSLGHSLLSVFVLIDLEGCDQG 177
           +  GE E T LG+ L  +F    + G  +G
Sbjct: 149 KAGGEREFTGLGNCLTKIFKADGITGLYRG 178


>AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding protein
           ASP2 protein.
          Length = 142

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 10/29 (34%), Positives = 16/29 (55%)

Query: 95  EVLSKNRHAQNGADLEHSSYLVRTVMGRI 123
           ++ +  + A+NGAD+     L   VM RI
Sbjct: 49  DIATNIQAAKNGADMSQLGCLKACVMKRI 77


>AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-binding
           protein ASP2 protein.
          Length = 142

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 10/29 (34%), Positives = 16/29 (55%)

Query: 95  EVLSKNRHAQNGADLEHSSYLVRTVMGRI 123
           ++ +  + A+NGAD+     L   VM RI
Sbjct: 49  DIATNIQAAKNGADMSQLGCLKACVMKRI 77


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.134    0.398 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,324
Number of Sequences: 429
Number of extensions: 2059
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 5
length of query: 194
length of database: 140,377
effective HSP length: 54
effective length of query: 140
effective length of database: 117,211
effective search space: 16409540
effective search space used: 16409540
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 42 (21.0 bits)