GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004169-TA|BGIBMGA004169-PA|undefined
         (186 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    28   0.048
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    28   0.048
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    23   1.4  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    22   4.2  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   4.2  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   5.5  

>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 28.3 bits (60), Expect = 0.048
 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 3   NDNALDLHHV-HQCFQRSLKEEDDVVIEAYIDGYNELVKFLN 43
           +D   D+H +  QC  ++  E++ +V   YID   E +KFL+
Sbjct: 86  DDFTEDVHEIIEQCVSKAADEDECMVARKYIDCALEKMKFLD 127


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 28.3 bits (60), Expect = 0.048
 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 3   NDNALDLHHV-HQCFQRSLKEEDDVVIEAYIDGYNELVKFLN 43
           +D   D+H +  QC  ++  E++ +V   YID   E +KFL+
Sbjct: 86  DDFTEDVHEIIEQCVSKAADEDECMVARKYIDCALEKMKFLD 127


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)

Query: 79  KKMMTYEKDANLHEKNGFVSGSRTMLRLHR 108
           +K   +E D +LHE +G V G R  + L R
Sbjct: 49  EKQNLHESD-DLHESDGRVGGKRRNILLRR 77


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 9/31 (29%), Positives = 15/31 (48%)

Query: 65  KHREGENAVYYESFKKMMTYEKDANLHEKNG 95
           K +  EN + YE  + +   +  A +  KNG
Sbjct: 286 KSQYEENNIEYEGIQDIFNTQSSAKVMSKNG 316


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 10/31 (32%), Positives = 14/31 (45%)

Query: 65  KHREGENAVYYESFKKMMTYEKDANLHEKNG 95
           K   G N V Y+  + +   E  A +  KNG
Sbjct: 286 KSEYGANNVQYQGVQDIFNTESIAKIMSKNG 316


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 10/31 (32%), Positives = 16/31 (51%)

Query: 65  KHREGENAVYYESFKKMMTYEKDANLHEKNG 95
           K + GEN V Y+  + ++  +  A    KNG
Sbjct: 283 KSQFGENNVQYQGSEDILNTQSLAKAVSKNG 313


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.321    0.135    0.410 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,628
Number of Sequences: 429
Number of extensions: 1572
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 186
length of database: 140,377
effective HSP length: 54
effective length of query: 132
effective length of database: 117,211
effective search space: 15471852
effective search space used: 15471852
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 41 (20.6 bits)