Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA004159-TA|BGIBMGA004159-PA|IPR000228|RNA 3'-terminal
phosphate cyclase, IPR013796|RNA 3'-terminal phosphate cyclase, insert
region, IPR013792|RNA 3'-terminal phosphate cyclase/enolpyruvate
transferase, alpha/beta
(288 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y11651-1|CAA72364.1| 366|Homo sapiens phosphate cyclase protein. 272 7e-73
BC012604-1|AAH12604.1| 379|Homo sapiens RTCD1 protein protein. 272 7e-73
AL663111-2|CAH73852.1| 379|Homo sapiens RNA terminal phosphate ... 272 7e-73
AL663111-1|CAH73853.1| 366|Homo sapiens RNA terminal phosphate ... 272 7e-73
AL445928-12|CAH72259.1| 366|Homo sapiens RNA terminal phosphate... 272 7e-73
AL445928-11|CAH72260.1| 379|Homo sapiens RNA terminal phosphate... 272 7e-73
AK022904-1|BAB14300.1| 373|Homo sapiens protein ( Homo sapiens ... 83 8e-16
BC001025-1|AAH01025.1| 373|Homo sapiens RNA terminal phosphate ... 83 1e-15
AL353151-4|CAH72285.1| 373|Homo sapiens RNA terminal phosphate ... 83 1e-15
AL158147-4|CAH70320.1| 373|Homo sapiens RNA terminal phosphate ... 83 1e-15
AJ276894-1|CAB89811.1| 373|Homo sapiens RNA 3'-terminal phospha... 83 1e-15
AL158147-1|CAH70317.1| 182|Homo sapiens RNA terminal phosphate ... 40 0.008
AL158147-3|CAH70319.1| 187|Homo sapiens RNA terminal phosphate ... 36 0.22
U79716-1|AAC51105.1| 3460|Homo sapiens reelin protein. 32 2.0
AC000121-1|AAB46357.2| 248|Homo sapiens unknown protein. 32 2.0
AL353151-5|CAH72286.1| 175|Homo sapiens RNA terminal phosphate ... 31 4.7
AL158147-2|CAH70318.1| 138|Homo sapiens RNA terminal phosphate ... 31 4.7
>Y11651-1|CAA72364.1| 366|Homo sapiens phosphate cyclase protein.
Length = 366
Score = 272 bits (668), Expect = 7e-73
Identities = 145/305 (47%), Positives = 197/305 (64%), Gaps = 19/305 (6%)
Query: 1 MCQAKLNGAHIRSTQLEFKPGKIRGGHYVADTRTAGSISLLLQVALPCAVMADGPVTLEL 60
+C +L GA I ST++ F P KI+GG + ADT+TAGS+ LL+QV++PC + A P L L
Sbjct: 62 LCDGQLEGAEIGSTEITFTPEKIKGGIHTADTKTAGSVCLLMQVSMPCVLFAASPSELHL 121
Query: 61 KGGTNAEMAPQIDYMTEVFKHAVKHFGVDFNLTIHRRGYFPKGGGHVTVEVSPLRHVQAA 120
KGGTNAEMAPQIDY VFK V+ FG FN I RGY+PKGGG V V +SP++ +
Sbjct: 122 KGGTNAEMAPQIDYTVMVFKPIVEKFGFIFNCDIKTRGYYPKGGGEVIVRMSPVKQLNPI 181
Query: 121 DVTRGGEVAAVYGWSYVAGCLPIKMAYSMADGA----KEKLRGICKNIH-IECYKEET-- 173
++T G V +YG ++VAG LP K+A MA A ++++R + NI ++ K++
Sbjct: 182 NLTERGCVTKIYGRAFVAGVLPFKVAKDMAAAAVRCIRKEIRDLYVNIQPVQEPKDQAFG 241
Query: 174 -----QLTSKLSSGYILGGDALGKRGVDAVEVGRTAGEMLRDAIRSGACVDSYTQDQLIV 228
+ ++ S+G + G +LGKRGV+A +VG A EML +R G VD Y QDQLIV
Sbjct: 242 NGNGIIIIAETSTGCLFAGSSLGKRGVNADKVGIEAAEMLLANLRHGGTVDEYLQDQLIV 301
Query: 229 YMALADGRSRVRVGEITLHTRTAIHFAELIAKAKFSIQPDGDQN-------VIECDGAGY 281
+MALA+G SR++ G +TLHT+TAIHFAE IAKAKF ++ D+ +IEC G G
Sbjct: 302 FMALANGVSRIKTGPVTLHTQTAIHFAEQIAKAKFIVKKSEDEEDAAKDTYIIECQGIGM 361
Query: 282 HNRNL 286
N NL
Sbjct: 362 TNPNL 366
>BC012604-1|AAH12604.1| 379|Homo sapiens RTCD1 protein protein.
Length = 379
Score = 272 bits (668), Expect = 7e-73
Identities = 145/305 (47%), Positives = 197/305 (64%), Gaps = 19/305 (6%)
Query: 1 MCQAKLNGAHIRSTQLEFKPGKIRGGHYVADTRTAGSISLLLQVALPCAVMADGPVTLEL 60
+C +L GA I ST++ F P KI+GG + ADT+TAGS+ LL+QV++PC + A P L L
Sbjct: 75 LCDGQLEGAEIGSTEITFTPEKIKGGIHTADTKTAGSVCLLMQVSMPCVLFAASPSELHL 134
Query: 61 KGGTNAEMAPQIDYMTEVFKHAVKHFGVDFNLTIHRRGYFPKGGGHVTVEVSPLRHVQAA 120
KGGTNAEMAPQIDY VFK V+ FG FN I RGY+PKGGG V V +SP++ +
Sbjct: 135 KGGTNAEMAPQIDYTVMVFKPIVEKFGFIFNCDIKTRGYYPKGGGEVIVRMSPVKQLNPI 194
Query: 121 DVTRGGEVAAVYGWSYVAGCLPIKMAYSMADGA----KEKLRGICKNIH-IECYKEET-- 173
++T G V +YG ++VAG LP K+A MA A ++++R + NI ++ K++
Sbjct: 195 NLTERGCVTKIYGRAFVAGVLPFKVAKDMAAAAVRCIRKEIRDLYVNIQPVQEPKDQAFG 254
Query: 174 -----QLTSKLSSGYILGGDALGKRGVDAVEVGRTAGEMLRDAIRSGACVDSYTQDQLIV 228
+ ++ S+G + G +LGKRGV+A +VG A EML +R G VD Y QDQLIV
Sbjct: 255 NGNGIIIIAETSTGCLFAGSSLGKRGVNADKVGIEAAEMLLANLRHGGTVDEYLQDQLIV 314
Query: 229 YMALADGRSRVRVGEITLHTRTAIHFAELIAKAKFSIQPDGDQN-------VIECDGAGY 281
+MALA+G SR++ G +TLHT+TAIHFAE IAKAKF ++ D+ +IEC G G
Sbjct: 315 FMALANGVSRIKTGPVTLHTQTAIHFAEQIAKAKFIVKKSEDEEDAAKDTYIIECQGIGM 374
Query: 282 HNRNL 286
N NL
Sbjct: 375 TNPNL 379
>AL663111-2|CAH73852.1| 379|Homo sapiens RNA terminal phosphate
cyclase domain 1 protein.
Length = 379
Score = 272 bits (668), Expect = 7e-73
Identities = 145/305 (47%), Positives = 197/305 (64%), Gaps = 19/305 (6%)
Query: 1 MCQAKLNGAHIRSTQLEFKPGKIRGGHYVADTRTAGSISLLLQVALPCAVMADGPVTLEL 60
+C +L GA I ST++ F P KI+GG + ADT+TAGS+ LL+QV++PC + A P L L
Sbjct: 75 LCDGQLEGAEIGSTEITFTPEKIKGGIHTADTKTAGSVCLLMQVSMPCVLFAASPSELHL 134
Query: 61 KGGTNAEMAPQIDYMTEVFKHAVKHFGVDFNLTIHRRGYFPKGGGHVTVEVSPLRHVQAA 120
KGGTNAEMAPQIDY VFK V+ FG FN I RGY+PKGGG V V +SP++ +
Sbjct: 135 KGGTNAEMAPQIDYTVMVFKPIVEKFGFIFNCDIKTRGYYPKGGGEVIVRMSPVKQLNPI 194
Query: 121 DVTRGGEVAAVYGWSYVAGCLPIKMAYSMADGA----KEKLRGICKNIH-IECYKEET-- 173
++T G V +YG ++VAG LP K+A MA A ++++R + NI ++ K++
Sbjct: 195 NLTERGCVTKIYGRAFVAGVLPFKVAKDMAAAAVRCIRKEIRDLYVNIQPVQEPKDQAFG 254
Query: 174 -----QLTSKLSSGYILGGDALGKRGVDAVEVGRTAGEMLRDAIRSGACVDSYTQDQLIV 228
+ ++ S+G + G +LGKRGV+A +VG A EML +R G VD Y QDQLIV
Sbjct: 255 NGNGIIIIAETSTGCLFAGSSLGKRGVNADKVGIEAAEMLLANLRHGGTVDEYLQDQLIV 314
Query: 229 YMALADGRSRVRVGEITLHTRTAIHFAELIAKAKFSIQPDGDQN-------VIECDGAGY 281
+MALA+G SR++ G +TLHT+TAIHFAE IAKAKF ++ D+ +IEC G G
Sbjct: 315 FMALANGVSRIKTGPVTLHTQTAIHFAEQIAKAKFIVKKSEDEEDAAKDTYIIECQGIGM 374
Query: 282 HNRNL 286
N NL
Sbjct: 375 TNPNL 379
>AL663111-1|CAH73853.1| 366|Homo sapiens RNA terminal phosphate
cyclase domain 1 protein.
Length = 366
Score = 272 bits (668), Expect = 7e-73
Identities = 145/305 (47%), Positives = 197/305 (64%), Gaps = 19/305 (6%)
Query: 1 MCQAKLNGAHIRSTQLEFKPGKIRGGHYVADTRTAGSISLLLQVALPCAVMADGPVTLEL 60
+C +L GA I ST++ F P KI+GG + ADT+TAGS+ LL+QV++PC + A P L L
Sbjct: 62 LCDGQLEGAEIGSTEITFTPEKIKGGIHTADTKTAGSVCLLMQVSMPCVLFAASPSELHL 121
Query: 61 KGGTNAEMAPQIDYMTEVFKHAVKHFGVDFNLTIHRRGYFPKGGGHVTVEVSPLRHVQAA 120
KGGTNAEMAPQIDY VFK V+ FG FN I RGY+PKGGG V V +SP++ +
Sbjct: 122 KGGTNAEMAPQIDYTVMVFKPIVEKFGFIFNCDIKTRGYYPKGGGEVIVRMSPVKQLNPI 181
Query: 121 DVTRGGEVAAVYGWSYVAGCLPIKMAYSMADGA----KEKLRGICKNIH-IECYKEET-- 173
++T G V +YG ++VAG LP K+A MA A ++++R + NI ++ K++
Sbjct: 182 NLTERGCVTKIYGRAFVAGVLPFKVAKDMAAAAVRCIRKEIRDLYVNIQPVQEPKDQAFG 241
Query: 174 -----QLTSKLSSGYILGGDALGKRGVDAVEVGRTAGEMLRDAIRSGACVDSYTQDQLIV 228
+ ++ S+G + G +LGKRGV+A +VG A EML +R G VD Y QDQLIV
Sbjct: 242 NGNGIIIIAETSTGCLFAGSSLGKRGVNADKVGIEAAEMLLANLRHGGTVDEYLQDQLIV 301
Query: 229 YMALADGRSRVRVGEITLHTRTAIHFAELIAKAKFSIQPDGDQN-------VIECDGAGY 281
+MALA+G SR++ G +TLHT+TAIHFAE IAKAKF ++ D+ +IEC G G
Sbjct: 302 FMALANGVSRIKTGPVTLHTQTAIHFAEQIAKAKFIVKKSEDEEDAAKDTYIIECQGIGM 361
Query: 282 HNRNL 286
N NL
Sbjct: 362 TNPNL 366
>AL445928-12|CAH72259.1| 366|Homo sapiens RNA terminal phosphate
cyclase domain 1 protein.
Length = 366
Score = 272 bits (668), Expect = 7e-73
Identities = 145/305 (47%), Positives = 197/305 (64%), Gaps = 19/305 (6%)
Query: 1 MCQAKLNGAHIRSTQLEFKPGKIRGGHYVADTRTAGSISLLLQVALPCAVMADGPVTLEL 60
+C +L GA I ST++ F P KI+GG + ADT+TAGS+ LL+QV++PC + A P L L
Sbjct: 62 LCDGQLEGAEIGSTEITFTPEKIKGGIHTADTKTAGSVCLLMQVSMPCVLFAASPSELHL 121
Query: 61 KGGTNAEMAPQIDYMTEVFKHAVKHFGVDFNLTIHRRGYFPKGGGHVTVEVSPLRHVQAA 120
KGGTNAEMAPQIDY VFK V+ FG FN I RGY+PKGGG V V +SP++ +
Sbjct: 122 KGGTNAEMAPQIDYTVMVFKPIVEKFGFIFNCDIKTRGYYPKGGGEVIVRMSPVKQLNPI 181
Query: 121 DVTRGGEVAAVYGWSYVAGCLPIKMAYSMADGA----KEKLRGICKNIH-IECYKEET-- 173
++T G V +YG ++VAG LP K+A MA A ++++R + NI ++ K++
Sbjct: 182 NLTERGCVTKIYGRAFVAGVLPFKVAKDMAAAAVRCIRKEIRDLYVNIQPVQEPKDQAFG 241
Query: 174 -----QLTSKLSSGYILGGDALGKRGVDAVEVGRTAGEMLRDAIRSGACVDSYTQDQLIV 228
+ ++ S+G + G +LGKRGV+A +VG A EML +R G VD Y QDQLIV
Sbjct: 242 NGNGIIIIAETSTGCLFAGSSLGKRGVNADKVGIEAAEMLLANLRHGGTVDEYLQDQLIV 301
Query: 229 YMALADGRSRVRVGEITLHTRTAIHFAELIAKAKFSIQPDGDQN-------VIECDGAGY 281
+MALA+G SR++ G +TLHT+TAIHFAE IAKAKF ++ D+ +IEC G G
Sbjct: 302 FMALANGVSRIKTGPVTLHTQTAIHFAEQIAKAKFIVKKSEDEEDAAKDTYIIECQGIGM 361
Query: 282 HNRNL 286
N NL
Sbjct: 362 TNPNL 366
>AL445928-11|CAH72260.1| 379|Homo sapiens RNA terminal phosphate
cyclase domain 1 protein.
Length = 379
Score = 272 bits (668), Expect = 7e-73
Identities = 145/305 (47%), Positives = 197/305 (64%), Gaps = 19/305 (6%)
Query: 1 MCQAKLNGAHIRSTQLEFKPGKIRGGHYVADTRTAGSISLLLQVALPCAVMADGPVTLEL 60
+C +L GA I ST++ F P KI+GG + ADT+TAGS+ LL+QV++PC + A P L L
Sbjct: 75 LCDGQLEGAEIGSTEITFTPEKIKGGIHTADTKTAGSVCLLMQVSMPCVLFAASPSELHL 134
Query: 61 KGGTNAEMAPQIDYMTEVFKHAVKHFGVDFNLTIHRRGYFPKGGGHVTVEVSPLRHVQAA 120
KGGTNAEMAPQIDY VFK V+ FG FN I RGY+PKGGG V V +SP++ +
Sbjct: 135 KGGTNAEMAPQIDYTVMVFKPIVEKFGFIFNCDIKTRGYYPKGGGEVIVRMSPVKQLNPI 194
Query: 121 DVTRGGEVAAVYGWSYVAGCLPIKMAYSMADGA----KEKLRGICKNIH-IECYKEET-- 173
++T G V +YG ++VAG LP K+A MA A ++++R + NI ++ K++
Sbjct: 195 NLTERGCVTKIYGRAFVAGVLPFKVAKDMAAAAVRCIRKEIRDLYVNIQPVQEPKDQAFG 254
Query: 174 -----QLTSKLSSGYILGGDALGKRGVDAVEVGRTAGEMLRDAIRSGACVDSYTQDQLIV 228
+ ++ S+G + G +LGKRGV+A +VG A EML +R G VD Y QDQLIV
Sbjct: 255 NGNGIIIIAETSTGCLFAGSSLGKRGVNADKVGIEAAEMLLANLRHGGTVDEYLQDQLIV 314
Query: 229 YMALADGRSRVRVGEITLHTRTAIHFAELIAKAKFSIQPDGDQN-------VIECDGAGY 281
+MALA+G SR++ G +TLHT+TAIHFAE IAKAKF ++ D+ +IEC G G
Sbjct: 315 FMALANGVSRIKTGPVTLHTQTAIHFAEQIAKAKFIVKKSEDEEDAAKDTYIIECQGIGM 374
Query: 282 HNRNL 286
N NL
Sbjct: 375 TNPNL 379
>AK022904-1|BAB14300.1| 373|Homo sapiens protein ( Homo sapiens
cDNA FLJ12842 fis, clone NT2RP2003286, weakly similar to
PROBABLE RNA 3'-TERMINAL PHOSPHATE CYCLASE (EC 6.5.1.4).
).
Length = 373
Score = 83.4 bits (197), Expect = 8e-16
Identities = 76/298 (25%), Positives = 127/298 (42%), Gaps = 29/298 (9%)
Query: 14 TQLEFKPGKIRGGHYVADTRTAGSISLLLQVALPCAVMADGPVTLELKGGTNAEMAPQID 73
T L ++PG + GG D I L+ L A P+ + L+G TN ++ P +D
Sbjct: 71 TTLYYQPGLLYGGSVEHDCSVLRGIGYYLESLLCLAPFMKHPLKIVLRGVTNDQVDPSVD 130
Query: 74 YMTEVFKHAVKHFGVD---FNLTIHRRGYFPKGGGHVTVEVSPLRHVQAADVTRGGEVAA 130
+ +K FG+D F L I RRG P GGG V + ++ +T G++
Sbjct: 131 VLKATALPLLKQFGIDGESFELNIVRRGMPPGGGGEVVFSCPVRKVLKPIQLTDPGKIKR 190
Query: 131 VYGWSYVAGCLPIKMAYSMADGAKEKLRGICKNIHIECYKEE-----------TQLTSKL 179
+ G +Y P +MA + D A+ L +I+I + L ++
Sbjct: 191 IRGMAYSVRVSP-QMANRIVDSARSILNKFIPDIYIYTDHMKGVNSGKSPGFGLSLVAET 249
Query: 180 SSGYILGGD-ALGKRGVDAV----EVGRTAGEMLRDAIRSGACVDSYTQDQLIVYMALA- 233
+SG L + A +G A ++GR +L + I G CVDS Q ++ M L
Sbjct: 250 TSGTFLSAELASNPQGQGAAVLPEDLGRNCARLLLEEIYRGGCVDSTNQSLALLLMTLGQ 309
Query: 234 DGRSRVRVGEITLHTRTAIHFAELIAKAKFSIQ--------PDGDQNVIECDGAGYHN 283
S+V +G ++ +T + + + F I+ GD+ ++ C G G+ N
Sbjct: 310 QDVSKVLLGPLSPYTIEFLRHLKSFFQIMFKIETKPCGEELKGGDKVLMTCVGIGFSN 367
>BC001025-1|AAH01025.1| 373|Homo sapiens RNA terminal phosphate
cyclase-like 1 protein.
Length = 373
Score = 83.0 bits (196), Expect = 1e-15
Identities = 76/298 (25%), Positives = 127/298 (42%), Gaps = 29/298 (9%)
Query: 14 TQLEFKPGKIRGGHYVADTRTAGSISLLLQVALPCAVMADGPVTLELKGGTNAEMAPQID 73
T L ++PG + GG D I L+ L A P+ + L+G TN ++ P +D
Sbjct: 71 TTLYYQPGLLYGGSVEHDCSVLRGIGYYLESLLCLAPFMKHPLKIVLRGVTNDQVDPSVD 130
Query: 74 YMTEVFKHAVKHFGVD---FNLTIHRRGYFPKGGGHVTVEVSPLRHVQAADVTRGGEVAA 130
+ +K FG+D F L I RRG P GGG V + ++ +T G++
Sbjct: 131 VLKATALPLLKQFGIDGESFELKIVRRGMPPGGGGEVVFSCPVRKVLKPIQLTDPGKIKR 190
Query: 131 VYGWSYVAGCLPIKMAYSMADGAKEKLRGICKNIHIECYKEE-----------TQLTSKL 179
+ G +Y P +MA + D A+ L +I+I + L ++
Sbjct: 191 IRGMAYSVRVSP-QMANRIVDSARSILNKFIPDIYIYTDHMKGVNSGKSPGFGLSLVAET 249
Query: 180 SSGYILGGD-ALGKRGVDAV----EVGRTAGEMLRDAIRSGACVDSYTQDQLIVYMALA- 233
+SG L + A +G A ++GR +L + I G CVDS Q ++ M L
Sbjct: 250 TSGTFLSAELASNPQGQGAAVLPEDLGRNCARLLLEEIYRGGCVDSTNQSLALLLMTLGQ 309
Query: 234 DGRSRVRVGEITLHTRTAIHFAELIAKAKFSIQ--------PDGDQNVIECDGAGYHN 283
S+V +G ++ +T + + + F I+ GD+ ++ C G G+ N
Sbjct: 310 QDVSKVLLGPLSPYTIEFLRHLKSFFQIMFKIETKPCGEELKGGDKVLMTCVGIGFSN 367
>AL353151-4|CAH72285.1| 373|Homo sapiens RNA terminal phosphate
cyclase-like 1 protein.
Length = 373
Score = 83.0 bits (196), Expect = 1e-15
Identities = 76/298 (25%), Positives = 127/298 (42%), Gaps = 29/298 (9%)
Query: 14 TQLEFKPGKIRGGHYVADTRTAGSISLLLQVALPCAVMADGPVTLELKGGTNAEMAPQID 73
T L ++PG + GG D I L+ L A P+ + L+G TN ++ P +D
Sbjct: 71 TTLYYQPGLLYGGSVEHDCSVLRGIGYYLESLLCLAPFMKHPLKIVLRGVTNDQVDPSVD 130
Query: 74 YMTEVFKHAVKHFGVD---FNLTIHRRGYFPKGGGHVTVEVSPLRHVQAADVTRGGEVAA 130
+ +K FG+D F L I RRG P GGG V + ++ +T G++
Sbjct: 131 VLKATALPLLKQFGIDGESFELKIVRRGMPPGGGGEVVFSCPVRKVLKPIQLTDPGKIKR 190
Query: 131 VYGWSYVAGCLPIKMAYSMADGAKEKLRGICKNIHIECYKEE-----------TQLTSKL 179
+ G +Y P +MA + D A+ L +I+I + L ++
Sbjct: 191 IRGMAYSVRVSP-QMANRIVDSARSILNKFIPDIYIYTDHMKGVNSGKSPGFGLSLVAET 249
Query: 180 SSGYILGGD-ALGKRGVDAV----EVGRTAGEMLRDAIRSGACVDSYTQDQLIVYMALA- 233
+SG L + A +G A ++GR +L + I G CVDS Q ++ M L
Sbjct: 250 TSGTFLSAELASNPQGQGAAVLPEDLGRNCARLLLEEIYRGGCVDSTNQSLALLLMTLGQ 309
Query: 234 DGRSRVRVGEITLHTRTAIHFAELIAKAKFSIQ--------PDGDQNVIECDGAGYHN 283
S+V +G ++ +T + + + F I+ GD+ ++ C G G+ N
Sbjct: 310 QDVSKVLLGPLSPYTIEFLRHLKSFFQIMFKIETKPCGEELKGGDKVLMTCVGIGFSN 367
>AL158147-4|CAH70320.1| 373|Homo sapiens RNA terminal phosphate
cyclase-like 1 protein.
Length = 373
Score = 83.0 bits (196), Expect = 1e-15
Identities = 76/298 (25%), Positives = 127/298 (42%), Gaps = 29/298 (9%)
Query: 14 TQLEFKPGKIRGGHYVADTRTAGSISLLLQVALPCAVMADGPVTLELKGGTNAEMAPQID 73
T L ++PG + GG D I L+ L A P+ + L+G TN ++ P +D
Sbjct: 71 TTLYYQPGLLYGGSVEHDCSVLRGIGYYLESLLCLAPFMKHPLKIVLRGVTNDQVDPSVD 130
Query: 74 YMTEVFKHAVKHFGVD---FNLTIHRRGYFPKGGGHVTVEVSPLRHVQAADVTRGGEVAA 130
+ +K FG+D F L I RRG P GGG V + ++ +T G++
Sbjct: 131 VLKATALPLLKQFGIDGESFELKIVRRGMPPGGGGEVVFSCPVRKVLKPIQLTDPGKIKR 190
Query: 131 VYGWSYVAGCLPIKMAYSMADGAKEKLRGICKNIHIECYKEE-----------TQLTSKL 179
+ G +Y P +MA + D A+ L +I+I + L ++
Sbjct: 191 IRGMAYSVRVSP-QMANRIVDSARSILNKFIPDIYIYTDHMKGVNSGKSPGFGLSLVAET 249
Query: 180 SSGYILGGD-ALGKRGVDAV----EVGRTAGEMLRDAIRSGACVDSYTQDQLIVYMALA- 233
+SG L + A +G A ++GR +L + I G CVDS Q ++ M L
Sbjct: 250 TSGTFLSAELASNPQGQGAAVLPEDLGRNCARLLLEEIYRGGCVDSTNQSLALLLMTLGQ 309
Query: 234 DGRSRVRVGEITLHTRTAIHFAELIAKAKFSIQ--------PDGDQNVIECDGAGYHN 283
S+V +G ++ +T + + + F I+ GD+ ++ C G G+ N
Sbjct: 310 QDVSKVLLGPLSPYTIEFLRHLKSFFQIMFKIETKPCGEELKGGDKVLMTCVGIGFSN 367
>AJ276894-1|CAB89811.1| 373|Homo sapiens RNA 3'-terminal phosphate
cyclase-like protein protein.
Length = 373
Score = 83.0 bits (196), Expect = 1e-15
Identities = 76/298 (25%), Positives = 127/298 (42%), Gaps = 29/298 (9%)
Query: 14 TQLEFKPGKIRGGHYVADTRTAGSISLLLQVALPCAVMADGPVTLELKGGTNAEMAPQID 73
T L ++PG + GG D I L+ L A P+ + L+G TN ++ P +D
Sbjct: 71 TTLYYQPGLLYGGSVEHDCSVLRGIGYYLESLLCLAPFMKHPLKIVLRGVTNDQVDPSVD 130
Query: 74 YMTEVFKHAVKHFGVD---FNLTIHRRGYFPKGGGHVTVEVSPLRHVQAADVTRGGEVAA 130
+ +K FG+D F L I RRG P GGG V + ++ +T G++
Sbjct: 131 VLKATALPLLKQFGIDGESFELKIVRRGMPPGGGGEVVFSCPVRKVLKPIQLTDPGKIKR 190
Query: 131 VYGWSYVAGCLPIKMAYSMADGAKEKLRGICKNIHIECYKEE-----------TQLTSKL 179
+ G +Y P +MA + D A+ L +I+I + L ++
Sbjct: 191 IRGMAYSVRVSP-QMANRIVDSARSILNKFIPDIYIYTDHMKGVNSGKSPGFGLSLVAET 249
Query: 180 SSGYILGGD-ALGKRGVDAV----EVGRTAGEMLRDAIRSGACVDSYTQDQLIVYMALAD 234
+SG L + A +G A ++GR +L + I G CVDS Q ++ M L
Sbjct: 250 TSGTFLSAELASNPQGQGAAVLPEDLGRNCARLLLEEIYRGGCVDSTNQSLALLLMTLGQ 309
Query: 235 -GRSRVRVGEITLHTRTAIHFAELIAKAKFSIQ--------PDGDQNVIECDGAGYHN 283
S+V +G ++ +T + + + F I+ GD+ ++ C G G+ N
Sbjct: 310 RDVSKVLLGPLSPYTIEFLRHLKSFFQIMFKIETKPCGEELKGGDKVLMTCVGIGFSN 367
>AL158147-1|CAH70317.1| 182|Homo sapiens RNA terminal phosphate
cyclase-like 1 protein.
Length = 182
Score = 40.3 bits (90), Expect = 0.008
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 19/166 (11%)
Query: 101 PKGGGHVTVEVSPLRHV-QAADVTRGGEVAAVYGWSYVAGCLPIKMAYSMADGAKEKLRG 159
P GGG V P+R V + +T G++ + G +Y P +MA + D A+ L
Sbjct: 2 PPGGGGEVVFSCPVRKVLKPIQLTDPGKIKRIRGMAYSVRVSP-QMANRIVDSARSILNK 60
Query: 160 ICKNIHIECYKEE-----------TQLTSKLSSGYILGGD-ALGKRGVDAV----EVGRT 203
+I+I + L ++ +SG L + A +G A ++GR
Sbjct: 61 FIPDIYIYTDHMKGVNSGKSPGFGLSLVAETTSGTFLSAELASNPQGQGAAVLPEDLGRN 120
Query: 204 AGEMLRDAIRSGACVDSYTQDQLIVYMALA-DGRSRVRVGEITLHT 248
+L + I G CVDS Q ++ M L S+V +G ++ +T
Sbjct: 121 CARLLLEEIYRGGCVDSTNQSLALLLMTLGQQDVSKVLLGPLSPYT 166
>AL158147-3|CAH70319.1| 187|Homo sapiens RNA terminal phosphate
cyclase-like 1 protein.
Length = 187
Score = 35.5 bits (78), Expect = 0.22
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 14/123 (11%)
Query: 175 LTSKLSSGYILGGD-ALGKRGVDAV----EVGRTAGEMLRDAIRSGACVDSYTQDQLIVY 229
L ++ +SG L + A +G A ++GR +L + I G CVDS Q ++
Sbjct: 59 LVAETTSGTFLSAELASNPQGQGAAVLPEDLGRNCARLLLEEIYRGGCVDSTNQSLALLL 118
Query: 230 MALA-DGRSRVRVGEITLHTRTAIHFAELIAKAKFSIQ--------PDGDQNVIECDGAG 280
M L S+V +G ++ +T + + + F I+ GD+ ++ C G G
Sbjct: 119 MTLGQQDVSKVLLGPLSPYTIEFLRHLKSFFQIMFKIETKPCGEELKGGDKVLMTCVGIG 178
Query: 281 YHN 283
+ N
Sbjct: 179 FSN 181
>U79716-1|AAC51105.1| 3460|Homo sapiens reelin protein.
Length = 3460
Score = 32.3 bits (70), Expect = 2.0
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 4/104 (3%)
Query: 163 NIHIECYKEET--QLTSKLSSGYILGGDALGKRGVDAVEVGRTAGEMLRDAIRSGACVDS 220
NI +EC ET Q + + + + G R + + T +L+ +I SG+C S
Sbjct: 217 NIWVECNNCETGEQCGAIMHGNAVTFCEPYGPRELITTGLNTTTASVLQFSIGSGSCRFS 276
Query: 221 YTQDQLIVYMALADGRSRVRVGEITL--HTRTAIHFAELIAKAK 262
Y+ +IV A + +++ +I + T IH L AK
Sbjct: 277 YSDPSIIVLYAKNNSADWIQLEKIRAPSNVSTIIHILYLPEDAK 320
>AC000121-1|AAB46357.2| 248|Homo sapiens unknown protein.
Length = 248
Score = 32.3 bits (70), Expect = 2.0
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 4/104 (3%)
Query: 163 NIHIECYKEET--QLTSKLSSGYILGGDALGKRGVDAVEVGRTAGEMLRDAIRSGACVDS 220
NI +EC ET Q + + + + G R + + T +L+ +I SG+C S
Sbjct: 35 NIWVECNNCETGEQCGAIMHGNAVTFCEPYGPRELITTGLNTTTASVLQFSIGSGSCRFS 94
Query: 221 YTQDQLIVYMALADGRSRVRVGEITL--HTRTAIHFAELIAKAK 262
Y+ +IV A + +++ +I + T IH L AK
Sbjct: 95 YSDPSIIVLYAKNNSADWIQLEKIRAPSNVSTIIHILYLPEDAK 138
>AL353151-5|CAH72286.1| 175|Homo sapiens RNA terminal phosphate
cyclase-like 1 protein.
Length = 175
Score = 31.1 bits (67), Expect = 4.7
Identities = 17/59 (28%), Positives = 27/59 (45%)
Query: 14 TQLEFKPGKIRGGHYVADTRTAGSISLLLQVALPCAVMADGPVTLELKGGTNAEMAPQI 72
T L ++PG + GG D I L+ L A P+ + L+G TN ++ P +
Sbjct: 71 TTLYYQPGLLYGGSVEHDCSVLRGIGYYLESLLCLAPFMKHPLKIVLRGVTNDQVDPSV 129
>AL158147-2|CAH70318.1| 138|Homo sapiens RNA terminal phosphate
cyclase-like 1 protein.
Length = 138
Score = 31.1 bits (67), Expect = 4.7
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 175 LTSKLSSGYILGGD-ALGKRGVDAV----EVGRTAGEMLRDAIRSGACVDSYTQDQLIVY 229
L ++ +SG L + A +G A ++GR +L + I G CVDS Q ++
Sbjct: 59 LVAETTSGTFLSAELASNPQGQGAAVLPEDLGRNCARLLLEEIYRGGCVDSTNQSLALLL 118
Query: 230 MALA-DGRSRVRVGEITLHT 248
M L S+V +G ++ +T
Sbjct: 119 MTLGQQDVSKVLLGPLSPYT 138
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.320 0.137 0.407
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,728,324
Number of Sequences: 224733
Number of extensions: 1627638
Number of successful extensions: 2284
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2249
Number of HSP's gapped (non-prelim): 22
length of query: 288
length of database: 73,234,838
effective HSP length: 89
effective length of query: 199
effective length of database: 53,233,601
effective search space: 10593486599
effective search space used: 10593486599
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 65 (30.3 bits)
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