BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA004156-TA|BGIBMGA004156-PA|IPR000719|Protein kinase,
IPR002290|Serine/threonine protein kinase, IPR011009|Protein
kinase-like
(500 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 48 2e-07
AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II ... 33 0.005
AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C prot... 31 0.029
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 25 1.1
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 25 1.5
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 23 5.9
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 23 5.9
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 47.6 bits (108), Expect = 2e-07
Identities = 52/195 (26%), Positives = 90/195 (46%), Gaps = 37/195 (18%)
Query: 21 LGKGHFARVEEATHRIIG---AKVAVKVIDLTCIKEEYARRNLHREPRVMARLRHPCIAA 77
LG G F RVE +I G A+K + I E ++++ E R+M +
Sbjct: 373 LGVGGFGRVELV--QIAGDSSRSFALKQMKKAQIVETRQQQHIMSEKRIMGEADCDFVVK 430
Query: 78 LYETMMHGPRLYVVMEAAGGGDLCSHVLGARGGARGLPEHRARALAAQLVSAVRHMHARA 137
L++T LY++MEA GG+L + VL +G + R A +V A ++H+R
Sbjct: 431 LFKTFKDRKYLYMLMEACLGGELWT-VLRDKG---HFDDGTTRFYTACVVEAFDYLHSRN 486
Query: 138 VVHR----------SSGGLR-----------------TPCGSLEYAAPELFIDGRKYGPE 170
+++R S G ++ T CG+ EY APE+ ++ + +
Sbjct: 487 IIYRDLKPENLLLDSQGYVKLVDFGFAKRLDHGRKTWTFCGTPEYVAPEVILN-KGHDIS 545
Query: 171 VDLWSIGVIVYGMVT 185
D WS+GV+++ ++T
Sbjct: 546 ADYWSLGVLMFELLT 560
>AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II
protein.
Length = 190
Score = 33.1 bits (72), Expect = 0.005
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 10/123 (8%)
Query: 151 GSLEYAAPELFIDGRKYGPEVDLWSIGVIVYGMVTXXXXXXXXXXXXXXXXXRPQLRAAI 210
G+ Y +PE+ + YG VD+W+ GVI+Y ++ + +L A I
Sbjct: 74 GTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLV--------GYPPFWDEDQHRLYAQI 124
Query: 211 ARGFTRKQRAALACVSNDCKTFIQHLLEPNVDLRMRIDDAACHRWL-KRPGMKMKTHPFA 269
G V+ + K I +L N R+ +A H W+ +R + H
Sbjct: 125 KTGSYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITASEALKHPWICQRERVASVVHRQE 184
Query: 270 TID 272
T+D
Sbjct: 185 TVD 187
Score = 23.0 bits (47), Expect = 5.9
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 125 QLVSAVRHMHARAVVHR 141
Q++ +V H H VVHR
Sbjct: 17 QILESVHHCHHNGVVHR 33
>AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C
protein.
Length = 149
Score = 30.7 bits (66), Expect = 0.029
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Query: 63 EPRVMA-RLRHPCIAALYETMMHGPRLYVVMEAAGGGDLCSHVLGARGGARGLPEHRARA 121
E RV+A + P + L+ RLY VME GGDL + + G E A
Sbjct: 34 EKRVLALSTKPPFLVQLHSCFQTMDRLYFVMEYVNGGDLMYQI--QQCGK--FKEPVAVF 89
Query: 122 LAAQLVSAVRHMHARAVVHR 141
A+++ + +H R +V+R
Sbjct: 90 YASEIAIGLFFLHGRGIVYR 109
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 25.4 bits (53), Expect = 1.1
Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 135 ARAVVHRSSGGLRTPCGSL--EYAAPELFIDGRKYGPEVDLWSIGVIVYGMVT 185
+R + + G T G + + APE I RK+ D+WS+G++ + +++
Sbjct: 782 SREIESATEGAYTTRGGKIPVRWTAPEA-IAFRKFTSASDVWSMGIVCWEVMS 833
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 25.0 bits (52), Expect = 1.5
Identities = 24/108 (22%), Positives = 46/108 (42%), Gaps = 6/108 (5%)
Query: 272 DPKTN-REIYRQISELCGQTIMDVVAQIKADPFGSTAGMYNIKAHLFNMRALPGTDLLWS 330
D K N E Y S+L +++ + ++ + + G N++ ++ P L+W
Sbjct: 288 DGKLNVNEFYMAFSKLYSVSVVSLDKSLEVNHISARVGD-NVEIKC-DVTGTPPPPLVWR 345
Query: 331 PNSIEARPLSPPEYRAKQERTESLGSKIEISKTALQASLKSAVENSDV 378
N + L+ PE R + + L +K+++ AV N DV
Sbjct: 346 RNGADLETLNEPEIRVFNDGSLYL-TKVQLIHAGNYTC--HAVRNQDV 390
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 23.0 bits (47), Expect = 5.9
Identities = 6/20 (30%), Positives = 15/20 (75%)
Query: 122 LAAQLVSAVRHMHARAVVHR 141
+A ++ +R++H++ +VHR
Sbjct: 702 IALDVLEGIRYLHSQGLVHR 721
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 23.0 bits (47), Expect = 5.9
Identities = 6/20 (30%), Positives = 15/20 (75%)
Query: 122 LAAQLVSAVRHMHARAVVHR 141
+A ++ +R++H++ +VHR
Sbjct: 740 IALDVLEGIRYLHSQGLVHR 759
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.321 0.134 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,634
Number of Sequences: 429
Number of extensions: 4810
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 9
length of query: 500
length of database: 140,377
effective HSP length: 61
effective length of query: 439
effective length of database: 114,208
effective search space: 50137312
effective search space used: 50137312
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 46 (22.6 bits)
- SilkBase 1999-2023 -