BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA004155-TA|BGIBMGA004155-PA|undefined
(311 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 27 0.28
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 26 0.37
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 24 2.0
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 23 2.6
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 22 6.0
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 22 6.0
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 22 6.0
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 22 6.0
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 6.0
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 22 7.9
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 22 7.9
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 7.9
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 22 7.9
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 22 7.9
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 22 7.9
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 26.6 bits (56), Expect = 0.28
Identities = 10/33 (30%), Positives = 23/33 (69%)
Query: 214 RLVDEQSGSLITHGNVLIKVLKRTTELRPMVED 246
RL D Q+G +++ N+ + +++T++ PMV++
Sbjct: 282 RLYDRQNGLVLSRMNLTLAKMEKTSKPLPMVDN 314
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 26.2 bits (55), Expect = 0.37
Identities = 8/26 (30%), Positives = 18/26 (69%)
Query: 84 TGRGDAAGITIEAYRTTKELLQLLDN 109
TG+G+ +T++A +T ++ ++DN
Sbjct: 182 TGKGELVSLTVQAMDSTNTMVYMVDN 207
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 23.8 bits (49), Expect = 2.0
Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Query: 242 PMVEDFSYECIRSALFGLGTVVDKIEDGLLEAFKAN 277
P E FSY A F TVVDK+ +L AN
Sbjct: 7 PSYEAFSYG--GQARFNNQTVVDKVPPDMLHLIDAN 40
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain
protein protein.
Length = 448
Score = 23.4 bits (48), Expect = 2.6
Identities = 7/29 (24%), Positives = 18/29 (62%)
Query: 217 DEQSGSLITHGNVLIKVLKRTTELRPMVE 245
D+Q S++ + +++ ++ +RPMV+
Sbjct: 318 DKQIASVVKSSELAVRIQRQENNIRPMVK 346
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.2 bits (45), Expect = 6.0
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 152 FNLIFPIRVRNAENGDEIKELVKDW 176
FN F V N + K+LV +W
Sbjct: 306 FNFAFIKNVSRDSNSSDFKKLVDNW 330
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 22.2 bits (45), Expect = 6.0
Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 7/65 (10%)
Query: 200 ESNAETYRANEFAQRLVDEQSGSLITHGNVLIKVLKRTTELRPMVEDFSYECIRSALFGL 259
E N E + E Q+ D S S+I V+ +L+ ++ DF + C+ G+
Sbjct: 299 EGNVEETNSEETHQK--DGSSDSVIKR-----TVVSSYLQLQDLLGDFEHPCVMDCKVGV 351
Query: 260 GTVVD 264
T ++
Sbjct: 352 RTYLE 356
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 22.2 bits (45), Expect = 6.0
Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 7/65 (10%)
Query: 200 ESNAETYRANEFAQRLVDEQSGSLITHGNVLIKVLKRTTELRPMVEDFSYECIRSALFGL 259
E N E + E Q+ D S S+I V+ +L+ ++ DF + C+ G+
Sbjct: 214 EGNVEETNSEETHQK--DGSSDSVIKR-----TVVSSYLQLQDLLGDFEHPCVMDCKVGV 266
Query: 260 GTVVD 264
T ++
Sbjct: 267 RTYLE 271
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 22.2 bits (45), Expect = 6.0
Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 7/65 (10%)
Query: 200 ESNAETYRANEFAQRLVDEQSGSLITHGNVLIKVLKRTTELRPMVEDFSYECIRSALFGL 259
E N E + E Q+ D S S+I V+ +L+ ++ DF + C+ G+
Sbjct: 533 EGNVEETNSEETHQK--DGSSDSVIKR-----TVVSSYLQLQDLLGDFEHPCVMDCKVGV 585
Query: 260 GTVVD 264
T ++
Sbjct: 586 RTYLE 590
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 22.2 bits (45), Expect = 6.0
Identities = 19/58 (32%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Query: 198 GIESNAETYRANEFAQRLVDEQSGSLITHGNVLIKVLKRTTELRPMVEDFSYECIRSA 255
G Y E L D QSG L T +I + R+T LR V + E R A
Sbjct: 583 GAGGGRRAYTEEELQAALRDIQSGKLGTRRAAVIYGIPRST-LRNKVYKLAMERERDA 639
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.8 bits (44), Expect = 7.9
Identities = 11/44 (25%), Positives = 18/44 (40%)
Query: 22 GEQSLFQAPWRLRSILVQENVYDHFKRAMKWKHDLGCSEKKPGI 65
G ++F L S ++ Y+ WK+D G K P +
Sbjct: 188 GRLNIFPFDDPLCSFAIESISYEQTAITYVWKNDEGTLRKSPSL 231
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.8 bits (44), Expect = 7.9
Identities = 11/44 (25%), Positives = 18/44 (40%)
Query: 22 GEQSLFQAPWRLRSILVQENVYDHFKRAMKWKHDLGCSEKKPGI 65
G ++F L S ++ Y+ WK+D G K P +
Sbjct: 188 GRLNIFPFDDPLCSFAIESISYEQTAITYVWKNDEGTLRKSPSL 231
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.8 bits (44), Expect = 7.9
Identities = 11/44 (25%), Positives = 18/44 (40%)
Query: 22 GEQSLFQAPWRLRSILVQENVYDHFKRAMKWKHDLGCSEKKPGI 65
G ++F L S ++ Y+ WK+D G K P +
Sbjct: 239 GRLNIFPFDDPLCSFAIESISYEQTAITYVWKNDEGTLRKSPSL 282
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.8 bits (44), Expect = 7.9
Identities = 11/44 (25%), Positives = 18/44 (40%)
Query: 22 GEQSLFQAPWRLRSILVQENVYDHFKRAMKWKHDLGCSEKKPGI 65
G ++F L S ++ Y+ WK+D G K P +
Sbjct: 188 GRLNIFPFDDPLCSFAIESISYEQTAITYVWKNDEGTLRKSPSL 231
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.8 bits (44), Expect = 7.9
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Query: 140 NDLANFASPVALFNLIFPIRVRNAENGDEIKELVKDW--TKLSFCERKHAL 188
NDL N + + +N I A+N D K + D+ LS E K +
Sbjct: 395 NDLYNVKNTLDSYNGSMEINQNIAQNIDHAKNTIIDYRNNDLSINEEKRTI 445
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 21.8 bits (44), Expect = 7.9
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 152 FNLIFPIRVRNAENGDEIKELVKDW 176
FN F V N + K+L+ +W
Sbjct: 306 FNFAFIKNVSRDSNSSDFKKLIDNW 330
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.321 0.137 0.415
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,221
Number of Sequences: 429
Number of extensions: 3325
Number of successful extensions: 18
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 15
length of query: 311
length of database: 140,377
effective HSP length: 58
effective length of query: 253
effective length of database: 115,495
effective search space: 29220235
effective search space used: 29220235
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 44 (21.8 bits)
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