GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004153-TA|BGIBMGA004153-PA|undefined
         (82 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   1.5  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   1.5  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   1.5  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    20   3.5  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 1.5
 Identities = 8/33 (24%), Positives = 18/33 (54%)

Query: 48 PEFQTKDAKDLKKETSLPYYKISLTSNLKIRQC 80
          PE  +K+  ++KK++++    +S  S     +C
Sbjct: 39 PEIYSKECDEMKKDSAVKGIPVSCISGRDRYEC 71


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 1.5
 Identities = 8/33 (24%), Positives = 18/33 (54%)

Query: 48 PEFQTKDAKDLKKETSLPYYKISLTSNLKIRQC 80
          PE  +K+  ++KK++++    +S  S     +C
Sbjct: 39 PEIYSKECDEMKKDSAVKGIPVSCISGRDRYEC 71


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 1.5
 Identities = 8/33 (24%), Positives = 18/33 (54%)

Query: 48 PEFQTKDAKDLKKETSLPYYKISLTSNLKIRQC 80
          PE  +K+  ++KK++++    +S  S     +C
Sbjct: 39 PEIYSKECDEMKKDSAVKGIPVSCISGRDRYEC 71


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 20.2 bits (40), Expect = 3.5
 Identities = 8/15 (53%), Positives = 12/15 (80%), Gaps = 1/15 (6%)

Query: 2   NNQEENIEKLTNSEN 16
           NNQ +NI+  TN++N
Sbjct: 417 NNQNDNIQN-TNNQN 430


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.308    0.125    0.349 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,471
Number of Sequences: 429
Number of extensions: 837
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 82
length of database: 140,377
effective HSP length: 47
effective length of query: 35
effective length of database: 120,214
effective search space:  4207490
effective search space used:  4207490
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.4 bits)
S2: 37 (19.0 bits)