Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA004152-TA|BGIBMGA004152-PA|undefined
(73 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF104252-1|AAD12721.1| 273|Homo sapiens transcriptional co-acti... 29 2.3
DQ099387-1|AAZ13763.1| 237|Homo sapiens cofactor required for S... 28 5.3
BC119723-1|AAI19724.1| 168|Homo sapiens LOC441089 protein protein. 27 7.0
BC119722-1|AAI19723.1| 168|Homo sapiens LOC441089 protein protein. 27 7.0
BC064608-1|AAH64608.1| 311|Homo sapiens cofactor required for S... 27 7.0
BC002878-1|AAH02878.1| 70|Homo sapiens CRSP8 protein protein. 27 7.0
AL713892-2|CAI17283.2| 311|Homo sapiens cofactor required for S... 27 7.0
AL713892-1|CAI17284.1| 237|Homo sapiens cofactor required for S... 27 7.0
AL603649-2|CAH72530.1| 237|Homo sapiens cofactor required for S... 27 7.0
AL603649-1|CAH72529.2| 311|Homo sapiens cofactor required for S... 27 7.0
AL513102-2|CAH72547.1| 237|Homo sapiens cofactor required for S... 27 7.0
AL513102-1|CAH72546.2| 311|Homo sapiens cofactor required for S... 27 7.0
AL160271-7|CAI13387.1| 237|Homo sapiens cofactor required for S... 27 7.0
AL160271-6|CAI13386.2| 311|Homo sapiens cofactor required for S... 27 7.0
AF230382-1|AAF37290.1| 273|Homo sapiens p37 TRAP/SMCC/PC2 subun... 27 7.0
>AF104252-1|AAD12721.1| 273|Homo sapiens transcriptional
co-activator CRSP34 protein.
Length = 273
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 6 LRYFQDKAHTYIQVPNNNIRT---VGQPSKYHPLGGSSFLSS 44
+ +FQD H+ + N R VG+PS+ HPL S LSS
Sbjct: 15 IAHFQDNLHSVNRDLNELERLSNLVGKPSENHPLHNSGLLSS 56
>DQ099387-1|AAZ13763.1| 237|Homo sapiens cofactor required for
Sp1 transcriptional activation subunit 8 34kDa protein.
Length = 237
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 6 LRYFQDKAHTYIQVPNNNIRT---VGQPSKYHPLGGSSFLS 43
+ +FQD H+ + N R VG+PS+ HPL S LS
Sbjct: 15 IAHFQDNLHSVDRDLNELERLSNLVGEPSENHPLHNSGLLS 55
>BC119723-1|AAI19724.1| 168|Homo sapiens LOC441089 protein
protein.
Length = 168
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 6 LRYFQDKAHTYIQVPNNNIRT---VGQPSKYHPLGGSSFLS 43
+ +FQD H+ + N R VG+PS+ HPL S LS
Sbjct: 53 IAHFQDNLHSVNRDLNELERLSNLVGKPSENHPLHNSGLLS 93
>BC119722-1|AAI19723.1| 168|Homo sapiens LOC441089 protein
protein.
Length = 168
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 6 LRYFQDKAHTYIQVPNNNIRT---VGQPSKYHPLGGSSFLS 43
+ +FQD H+ + N R VG+PS+ HPL S LS
Sbjct: 53 IAHFQDNLHSVNRDLNELERLSNLVGKPSENHPLHNSGLLS 93
>BC064608-1|AAH64608.1| 311|Homo sapiens cofactor required for
Sp1 transcriptional activation, subunit 8, 34kDa
protein.
Length = 311
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 6 LRYFQDKAHTYIQVPNNNIRT---VGQPSKYHPLGGSSFLS 43
+ +FQD H+ + N R VG+PS+ HPL S LS
Sbjct: 53 IAHFQDNLHSVNRDLNELERLSNLVGKPSENHPLHNSGLLS 93
>BC002878-1|AAH02878.1| 70|Homo sapiens CRSP8 protein protein.
Length = 70
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 6 LRYFQDKAHTYIQVPNNNIRT---VGQPSKYHPLGGSSFLS 43
+ +FQD H+ + N R VG+PS+ HPL S LS
Sbjct: 15 IAHFQDNLHSVNRDLNELERLSNLVGKPSENHPLHNSGLLS 55
>AL713892-2|CAI17283.2| 311|Homo sapiens cofactor required for
Sp1 transcriptional activation, subunit 8, 34kDa
protein.
Length = 311
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 6 LRYFQDKAHTYIQVPNNNIRT---VGQPSKYHPLGGSSFLS 43
+ +FQD H+ + N R VG+PS+ HPL S LS
Sbjct: 53 IAHFQDNLHSVNRDLNELERLSNLVGKPSENHPLHNSGLLS 93
>AL713892-1|CAI17284.1| 237|Homo sapiens cofactor required for
Sp1 transcriptional activation, subunit 8, 34kDa
protein.
Length = 237
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 6 LRYFQDKAHTYIQVPNNNIRT---VGQPSKYHPLGGSSFLS 43
+ +FQD H+ + N R VG+PS+ HPL S LS
Sbjct: 15 IAHFQDNLHSVNRDLNELERLSNLVGKPSENHPLHNSGLLS 55
>AL603649-2|CAH72530.1| 237|Homo sapiens cofactor required for
Sp1 transcriptional activation, subunit 8, 34kDa
protein.
Length = 237
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 6 LRYFQDKAHTYIQVPNNNIRT---VGQPSKYHPLGGSSFLS 43
+ +FQD H+ + N R VG+PS+ HPL S LS
Sbjct: 15 IAHFQDNLHSVNRDLNELERLSNLVGKPSENHPLHNSGLLS 55
>AL603649-1|CAH72529.2| 311|Homo sapiens cofactor required for
Sp1 transcriptional activation, subunit 8, 34kDa
protein.
Length = 311
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 6 LRYFQDKAHTYIQVPNNNIRT---VGQPSKYHPLGGSSFLS 43
+ +FQD H+ + N R VG+PS+ HPL S LS
Sbjct: 53 IAHFQDNLHSVNRDLNELERLSNLVGKPSENHPLHNSGLLS 93
>AL513102-2|CAH72547.1| 237|Homo sapiens cofactor required for
Sp1 transcriptional activation, subunit 8, 34kDa
protein.
Length = 237
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 6 LRYFQDKAHTYIQVPNNNIRT---VGQPSKYHPLGGSSFLS 43
+ +FQD H+ + N R VG+PS+ HPL S LS
Sbjct: 15 IAHFQDNLHSVNRDLNELERLSNLVGKPSENHPLHNSGLLS 55
>AL513102-1|CAH72546.2| 311|Homo sapiens cofactor required for
Sp1 transcriptional activation, subunit 8, 34kDa
protein.
Length = 311
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 6 LRYFQDKAHTYIQVPNNNIRT---VGQPSKYHPLGGSSFLS 43
+ +FQD H+ + N R VG+PS+ HPL S LS
Sbjct: 53 IAHFQDNLHSVNRDLNELERLSNLVGKPSENHPLHNSGLLS 93
>AL160271-7|CAI13387.1| 237|Homo sapiens cofactor required for
Sp1 transcriptional activation, subunit 8, 34kDa
protein.
Length = 237
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 6 LRYFQDKAHTYIQVPNNNIRT---VGQPSKYHPLGGSSFLS 43
+ +FQD H+ + N R VG+PS+ HPL S LS
Sbjct: 15 IAHFQDNLHSVNRDLNELERLSNLVGKPSENHPLHNSGLLS 55
>AL160271-6|CAI13386.2| 311|Homo sapiens cofactor required for
Sp1 transcriptional activation, subunit 8, 34kDa
protein.
Length = 311
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 6 LRYFQDKAHTYIQVPNNNIRT---VGQPSKYHPLGGSSFLS 43
+ +FQD H+ + N R VG+PS+ HPL S LS
Sbjct: 53 IAHFQDNLHSVNRDLNELERLSNLVGKPSENHPLHNSGLLS 93
>AF230382-1|AAF37290.1| 273|Homo sapiens p37 TRAP/SMCC/PC2
subunit protein.
Length = 273
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 6 LRYFQDKAHTYIQVPNNNIRT---VGQPSKYHPLGGSSFLS 43
+ +FQD H+ + N R VG+PS+ HPL S LS
Sbjct: 15 IAHFQDNLHSVNRDLNELERLSNLVGKPSENHPLHNSGLLS 55
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.316 0.134 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,019,730
Number of Sequences: 224733
Number of extensions: 214113
Number of successful extensions: 207
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 207
Number of HSP's gapped (non-prelim): 15
length of query: 73
length of database: 73,234,838
effective HSP length: 52
effective length of query: 21
effective length of database: 61,548,722
effective search space: 1292523162
effective search space used: 1292523162
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 57 (27.1 bits)
- SilkBase 1999-2023 -