GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004152-TA|BGIBMGA004152-PA|undefined
         (73 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   1.2  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      20   3.6  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    19   8.2  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.4 bits (43), Expect = 1.2
 Identities = 8/11 (72%), Positives = 9/11 (81%)

Query: 30  PSKYHPLGGSS 40
           PS+YHP  GSS
Sbjct: 323 PSQYHPHRGSS 333


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 19.8 bits (39), Expect = 3.6
 Identities = 9/25 (36%), Positives = 13/25 (52%), Gaps = 3/25 (12%)

Query: 1   MPESRLRYFQDKA---HTYIQVPNN 22
           +PE RL YF +     H Y  + +N
Sbjct: 214 VPEQRLNYFTEDVGLNHFYFMLNHN 238



 Score = 18.6 bits (36), Expect = 8.2
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 27 VGQPSKYHP 35
          V QP+ YHP
Sbjct: 45 VDQPTVYHP 53


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 18.6 bits (36), Expect = 8.2
 Identities = 9/28 (32%), Positives = 11/28 (39%)

Query: 11  DKAHTYIQVPNNNIRTVGQPSKYHPLGG 38
           D+   Y     NN       +KYH  GG
Sbjct: 183 DEVMPYYLKSENNTELSRVGTKYHRSGG 210


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.316    0.134    0.393 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,547
Number of Sequences: 429
Number of extensions: 475
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 73
length of database: 140,377
effective HSP length: 46
effective length of query: 27
effective length of database: 120,643
effective search space:  3257361
effective search space used:  3257361
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.3 bits)
S2: 36 (18.6 bits)