GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004111-TA|BGIBMGA004111-PA|undefined
         (143 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    25   0.24 
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    21   3.8  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              21   5.1  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    20   8.9  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    20   8.9  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              20   8.9  

>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 25.4 bits (53), Expect = 0.24
 Identities = 16/72 (22%), Positives = 35/72 (48%), Gaps = 5/72 (6%)

Query: 49  EFNKLYEAYIEYVDINLISLNVPQAIRLLIE-VEN--FVQNEDLFPENVHRKWIKRFQLA 105
           + N++Y++Y  Y+D     +N+  + R     VEN   ++N ++F +     W    +++
Sbjct: 449 QLNRMYKSYPNYIDKETKDMNLEISTRPKSNTVENACVLKNTEIFKDK--SDWFDYSEVS 506

Query: 106 KICSMRGVCMLE 117
           K      +C+ E
Sbjct: 507 KWVQKGQICLKE 518


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 8/23 (34%), Positives = 15/23 (65%)

Query: 110 MRGVCMLESGDLAEAKKQLLHAM 132
           +R + M   GDL +  ++L+HA+
Sbjct: 227 LRIISMQMGGDLGQVYRRLVHAV 249


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 13/40 (32%), Positives = 20/40 (50%)

Query: 63  INLISLNVPQAIRLLIEVENFVQNEDLFPENVHRKWIKRF 102
           IN+   NV   I   ++  +FV  +  F E+V R+  K F
Sbjct: 52  INIEDENVQLYIECAMKKFSFVDKDGNFNEHVSREIAKIF 91


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)

Query: 128 LLHAMELYYYPFP 140
           +LHA++LYY   P
Sbjct: 264 VLHALQLYYPHVP 276


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)

Query: 128 LLHAMELYYYPFP 140
           +LHA++LYY   P
Sbjct: 279 VLHALQLYYPHVP 291


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 7/11 (63%), Positives = 9/11 (81%)

Query: 79  EVENFVQNEDL 89
           E+E F +NEDL
Sbjct: 257 ELEQFAENEDL 267


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.324    0.137    0.407 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,174
Number of Sequences: 429
Number of extensions: 1584
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 143
length of database: 140,377
effective HSP length: 52
effective length of query: 91
effective length of database: 118,069
effective search space: 10744279
effective search space used: 10744279
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 40 (20.2 bits)