GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004110-TA|BGIBMGA004110-PA|undefined
         (337 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    28   0.10 
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    28   0.10 
DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              25   0.94 
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    24   1.6  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   8.7  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 28.3 bits (60), Expect = 0.10
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)

Query: 283 VSISVTSGTTYCGVVGHVLRREYTVIGPTVN 313
           ++I + SG    GV+GH + R Y + G TVN
Sbjct: 510 ITIGIHSGEVVTGVIGHRMPR-YCLFGNTVN 539


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 28.3 bits (60), Expect = 0.10
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)

Query: 283 VSISVTSGTTYCGVVGHVLRREYTVIGPTVN 313
           ++I + SG    GV+GH + R Y + G TVN
Sbjct: 510 ITIGIHSGEVVTGVIGHRMPR-YCLFGNTVN 539


>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 25.0 bits (52), Expect = 0.94
 Identities = 11/38 (28%), Positives = 19/38 (50%)

Query: 210 NVLTDIVNEAYKRVSCAASDSGGLVNKVSMFDKDMMFL 247
           N+L  ++ EA+K +     DS   V+     +K  MF+
Sbjct: 92  NLLKKVIPEAFKEIGVEMIDSCSNVDSSDKCEKSFMFM 129


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 9/32 (28%), Positives = 16/32 (50%)

Query: 141 ECISNDYREYSLRPAVVAAMRSTWWPSLRRFM 172
           +C+     +Y   P+VV   +S+ W  LR  +
Sbjct: 110 DCLLGIVDDYQRNPSVVGRKKSSGWRKLRNIV 141


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 5/42 (11%)

Query: 57   VIVGQPVWD-----VKAAEYMSSAGDVLTSASAWMYVNEAEY 93
            VIV  P+ D     VK +++  S  D+L +A   + +N   Y
Sbjct: 1397 VIVNTPIMDAHFKDVKLSDFGFSTEDILDTADEDLLINNVFY 1438


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.318    0.132    0.390 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,820
Number of Sequences: 429
Number of extensions: 3721
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 5
length of query: 337
length of database: 140,377
effective HSP length: 58
effective length of query: 279
effective length of database: 115,495
effective search space: 32223105
effective search space used: 32223105
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 44 (21.8 bits)