GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004108-TA|BGIBMGA004108-PA|IPR001357|BRCT, IPR004274|NLI
interacting factor, IPR011947|FCP1-like phosphatase, phosphatase
domain, IPR011053|Single hybrid motif
         (691 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    41   4e-05
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    24   3.6  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              24   3.6  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    23   8.4  

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 40.7 bits (91), Expect = 4e-05
 Identities = 24/101 (23%), Positives = 47/101 (46%), Gaps = 6/101 (5%)

Query: 374 PAEPVWTETSDGQIEVEDPDDYLIYLEDILKRIHKHFYDVYDKMGQKQIPDLKIVIPEVK 433
           P+EPV+    D ++  + P DYL    D  + +    ++ +    + ++P   I +P++ 
Sbjct: 15  PSEPVYVPKGDNKVAFDIPPDYL---PDRYRSVATQVFNRFGDDTESKLPVKAITLPDLS 71

Query: 434 SEVLTGTSLVFSGLVPTHQKLETSRAYLVARSLGAEVTQDF 474
             +  G    FS  +P H+K+    A L+   +G    +DF
Sbjct: 72  IPMQLGRRQPFSLFIPAHRKI---AARLIDIFMGMRTYEDF 109


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 14/63 (22%), Positives = 22/63 (34%)

Query: 300 EEKPKLTIGKNGTQPQVQEMPTLDAEPDENLEKPANNFEKPTEGSNGKVIKEVMEEKPVD 359
           +E  + ++ K    PQ      LD+  D  +E      +KP   S       V      +
Sbjct: 552 DELHRASLSKTPQPPQCPRFRKLDSPSDSGIESGTEKPDKPASSSASSAPTSVCSSPRSE 611

Query: 360 IKE 362
            KE
Sbjct: 612 DKE 614


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 9/22 (40%), Positives = 15/22 (68%)

Query: 115 VHSVPELKVSEELAQKLGKEDA 136
           +H++PE+KV+     K  KE+A
Sbjct: 398 IHTIPEVKVTPRFQAKRLKEEA 419


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 1/47 (2%)

Query: 576 SFSSDDIADMDREVEDIFNESDESSTDDEKPSQDDVDDEENLKEDQL 622
           S  S  +++ D EV+ I   S++S TDD    Q   D    +   +L
Sbjct: 196 SAGSPSVSESD-EVDVIGYTSNQSDTDDHSSVQSSSDSGVTMSTSRL 241


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.314    0.133    0.388 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,678
Number of Sequences: 429
Number of extensions: 7810
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 4
length of query: 691
length of database: 140,377
effective HSP length: 62
effective length of query: 629
effective length of database: 113,779
effective search space: 71566991
effective search space used: 71566991
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 47 (23.0 bits)