GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004105-TA|BGIBMGA004105-PA|undefined
         (66 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   0.72 
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                20   2.9  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    19   3.9  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    18   8.9  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 0.72
 Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 6/50 (12%)

Query: 20  DSDELETEENPSKEWMLVYEI------EIQRKNLLHPFFQNGGWETKVAT 63
           D   LE    P   W +  EI      ++QR NLL     + G +T+ +T
Sbjct: 284 DCGGLEFTAAPFNGWYMSTEIGSRDLCDVQRYNLLETIATHMGLDTRTST 333


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 19.8 bits (39), Expect = 2.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)

Query: 37 VYEIEIQRKNLLHPF 51
          VY+  I+ KN L PF
Sbjct: 36 VYKNNIETKNQLSPF 50


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
          protein MRJP6 protein.
          Length = 437

 Score = 19.4 bits (38), Expect = 3.9
 Identities = 8/21 (38%), Positives = 10/21 (47%)

Query: 17 QRRDSDELETEENPSKEWMLV 37
          QR+ S  LE   N   EW  +
Sbjct: 24 QRKSSKNLEHSMNVIHEWKYI 44


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 18.2 bits (35), Expect = 8.9
 Identities = 7/11 (63%), Positives = 9/11 (81%)

Query: 1   MLAGEEASIEL 11
           MLAG + S+EL
Sbjct: 353 MLAGTQQSVEL 363


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.313    0.130    0.392 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,912
Number of Sequences: 429
Number of extensions: 513
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 66
length of database: 140,377
effective HSP length: 44
effective length of query: 22
effective length of database: 121,501
effective search space:  2673022
effective search space used:  2673022
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.7 bits)
S2: 35 (18.2 bits)