Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA004096-TA|BGIBMGA004096-PA|IPR000595|Cyclic
nucleotide-binding, IPR012198|cAMP-dependent protein kinase regulatory
subunit, IPR003117|cAMP-dependent protein kinase regulator, type II
PKA R subunit, IPR002373|cAMP-dependent protein kinase
(382 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 120 3e-29
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 54 2e-09
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 54 2e-09
DQ435337-1|ABD92652.1| 135|Apis mellifera OBP20 protein. 25 0.82
DQ435336-1|ABD92651.1| 135|Apis mellifera OBP19 protein. 25 0.82
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 23 5.8
DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein ... 22 7.6
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 7.6
AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein ... 22 7.6
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 120 bits (288), Expect = 3e-29
Identities = 81/259 (31%), Positives = 123/259 (47%), Gaps = 8/259 (3%)
Query: 107 KSDAQRARLAEAVRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIEN 166
K D R + A+ ++L+ Q+++ G +IR+GD G YV+E
Sbjct: 85 KRDRSRELIKAAILANDFMKNLELTQIRRDRGLHVSCSFSAGSTIIREGDVGSIVYVMEE 144
Query: 167 GVFDVLVTGDDRVEKVVHTYEGSGSFGELALMYNMPRAASVRAQTAGALWAMDRHTFRRI 226
G +V G K + T GELA++YN R A++ A T LWA+DR F+ I
Sbjct: 145 GKVEVSRDG-----KYLSTLAPGKVLGELAILYNCKRTATITAATDCQLWAIDRQCFQTI 199
Query: 227 LLKSAFKKRKLYEELLDKVPMLKALQPYERANLADALLPRTLVEGELIIRQGDTADGMYF 286
++++ ++ Y + L VP+ K L ++D L G+ IIRQG D +
Sbjct: 200 MMRTGLSRQAEYTDFLKSVPIFKNLPEETLIKISDVLEETFYNNGDYIIRQGARGDTFFI 259
Query: 287 VEDGSVSIRITRDDGNEHE-IKRLGKGDYFGELALVTHKPRAASVYAIGATKVAFL--DV 343
+ G V + I + D E + I+ L KGD+FGE AL R A++ A V+ L D
Sbjct: 260 ISRGQVRVTIKQPDTPEEKYIRTLSKGDFFGEKALQGDDLRTANIIADDPEGVSCLVIDR 319
Query: 344 ETFERLLGPCMEIMKRNID 362
ETF +L+ EI R D
Sbjct: 320 ETFNQLISSLDEIRTRYKD 338
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 54.4 bits (125), Expect = 2e-09
Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 6/120 (5%)
Query: 119 VRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFDVLVTGDDR 178
V + F + D+ + V+ + + +PG+ +I++G G Y I+ G+ D+++ +
Sbjct: 451 VASVPFFANADSNFVSDVVTKLRYEVFQPGDIIIKEGTIGSKMYFIQEGIVDIVMANGE- 509
Query: 179 VEKVVHTYEGSGS-FGELALMYNMPRAASVRAQTAGALWAMDRHTFRRILLKSAFKKRKL 237
V T GS FGE+ L+ N R ASVRA+T L+++ F +L + +R +
Sbjct: 510 ----VATSLSDGSYFGEICLLTNARRVASVRAETYCNLFSLSVDHFNAVLDQYPLMRRTM 565
Score = 53.2 bits (122), Expect = 4e-09
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
Query: 271 GELIIRQGDTADGMYFVEDGSVSIRITRDDGNEHEIKRLGKGDYFGELALVTHKPRAASV 330
G++II++G MYF+++G V I + N L G YFGE+ L+T+ R ASV
Sbjct: 480 GDIIIKEGTIGSKMYFIQEGIVDIVMA----NGEVATSLSDGSYFGEICLLTNARRVASV 535
Query: 331 YAIGATKVAFLDVETFERLLGPCMEIMKRNIDDYEEQLVKLFGDKSNL 378
A + L V+ F +L +M+R ++ + + G NL
Sbjct: 536 RAETYCNLFSLSVDHFNAVLDQ-YPLMRRTMESVAAERLNKIGKNPNL 582
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 54.4 bits (125), Expect = 2e-09
Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 6/120 (5%)
Query: 119 VRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFDVLVTGDDR 178
V + F + D+ + V+ + + +PG+ +I++G G Y I+ G+ D+++ +
Sbjct: 419 VASVPFFANADSNFVSDVVTKLRYEVFQPGDIIIKEGTIGSKMYFIQEGIVDIVMANGE- 477
Query: 179 VEKVVHTYEGSGS-FGELALMYNMPRAASVRAQTAGALWAMDRHTFRRILLKSAFKKRKL 237
V T GS FGE+ L+ N R ASVRA+T L+++ F +L + +R +
Sbjct: 478 ----VATSLSDGSYFGEICLLTNARRVASVRAETYCNLFSLSVDHFNAVLDQYPLMRRTM 533
Score = 53.2 bits (122), Expect = 4e-09
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
Query: 271 GELIIRQGDTADGMYFVEDGSVSIRITRDDGNEHEIKRLGKGDYFGELALVTHKPRAASV 330
G++II++G MYF+++G V I + N L G YFGE+ L+T+ R ASV
Sbjct: 448 GDIIIKEGTIGSKMYFIQEGIVDIVMA----NGEVATSLSDGSYFGEICLLTNARRVASV 503
Query: 331 YAIGATKVAFLDVETFERLLGPCMEIMKRNIDDYEEQLVKLFGDKSNL 378
A + L V+ F +L +M+R ++ + + G NL
Sbjct: 504 RAETYCNLFSLSVDHFNAVLDQ-YPLMRRTMESVAAERLNKIGKNPNL 550
>DQ435337-1|ABD92652.1| 135|Apis mellifera OBP20 protein.
Length = 135
Score = 25.4 bits (53), Expect = 0.82
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 340 FLDVETFERLLGPCMEIMKRNIDDYEEQLVKLFGDKSNLTDV 381
+LD ++L+ C I NI +LVK FG + +V
Sbjct: 91 YLDENVIKKLVAECSVISDANIYIRFNKLVKCFGKYKTMKEV 132
>DQ435336-1|ABD92651.1| 135|Apis mellifera OBP19 protein.
Length = 135
Score = 25.4 bits (53), Expect = 0.82
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 340 FLDVETFERLLGPCMEIMKRNIDDYEEQLVKLFGDKSNLTDV 381
+LD ++L+ C I NI +LVK FG + +V
Sbjct: 91 YLDENVIKKLVAECSVISDANIYIRFNKLVKCFGKYKTMKEV 132
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 22.6 bits (46), Expect = 5.8
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 275 IRQGDTADGMYFVEDGSVSIR 295
+RQ DG+ + D SVSI+
Sbjct: 150 LRQSSALDGVTLLADNSVSIK 170
>DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein 1
protein.
Length = 116
Score = 22.2 bits (45), Expect = 7.6
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 344 ETFERLLGPCMEIMKRNIDDYEE 366
E F+ C EI K+N+D E
Sbjct: 69 EAFQTQCKKCTEIQKQNLDKLAE 91
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 22.2 bits (45), Expect = 7.6
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 51 TTIVRGPVAGTPDESIISDEEEPPVARFNNRRK 83
T V PVAG P ESI+ E + V N ++K
Sbjct: 507 TLRVTCPVAGYPIESIVW-ERDTRVLPINRKQK 538
>AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein
protein.
Length = 116
Score = 22.2 bits (45), Expect = 7.6
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 344 ETFERLLGPCMEIMKRNIDDYEE 366
E F+ C EI K+N+D E
Sbjct: 69 EAFQTQCKKCTEIQKQNLDKLAE 91
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.319 0.137 0.389
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,035
Number of Sequences: 429
Number of extensions: 4155
Number of successful extensions: 25
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 11
Number of HSP's gapped (non-prelim): 11
length of query: 382
length of database: 140,377
effective HSP length: 59
effective length of query: 323
effective length of database: 115,066
effective search space: 37166318
effective search space used: 37166318
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 45 (22.2 bits)
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