Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA004088-TA|BGIBMGA004088-PA|IPR001452|Src homology-3
(122 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB083209-1|BAC54133.1| 87|Apis mellifera hypothetical protein ... 23 0.99
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 21 3.0
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 3.0
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 21 3.0
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 20 6.9
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 20 6.9
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 20 6.9
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 20 6.9
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 20 6.9
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 20 9.2
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 20 9.2
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 20 9.2
>AB083209-1|BAC54133.1| 87|Apis mellifera hypothetical protein
protein.
Length = 87
Score = 23.0 bits (47), Expect = 0.99
Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 5/47 (10%)
Query: 26 DPRQFQSPVPTPPPDPIRSTVNQGTDTSE-----VPPTRIFVALYDY 67
DPR + PV PP P + + G VPP + F + Y
Sbjct: 41 DPRSNRGPVLFPPGPPPNNEDSSGVIVGASGYGFVPPNQAFYRFFYY 87
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 21.4 bits (43), Expect = 3.0
Identities = 8/14 (57%), Positives = 8/14 (57%)
Query: 30 FQSPVPTPPPDPIR 43
F P PPP PIR
Sbjct: 369 FDLDEPLPPPPPIR 382
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.4 bits (43), Expect = 3.0
Identities = 8/12 (66%), Positives = 8/12 (66%)
Query: 28 RQFQSPVPTPPP 39
RQ Q P P PPP
Sbjct: 1351 RQQQPPPPPPPP 1362
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 21.4 bits (43), Expect = 3.0
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 5/37 (13%)
Query: 38 PPDPIRSTVNQGT-DTSEVPPTRIFVALYDYDARTDE 73
PP P R++ +QGT SEV T Y + TDE
Sbjct: 253 PPQPDRTSKDQGTIGESEVFDT----TRYPHGCSTDE 285
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 20.2 bits (40), Expect = 6.9
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 33 PVPTPPPDPIRST 45
P P PPP P S+
Sbjct: 339 PKPAPPPPPPSSS 351
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 20.2 bits (40), Expect = 6.9
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 31 QSPVPTPPPDPI 42
Q PVP P P P+
Sbjct: 110 QIPVPVPVPVPV 121
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 20.2 bits (40), Expect = 6.9
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 31 QSPVPTPPPDPI 42
Q PVP P P P+
Sbjct: 110 QIPVPVPVPVPV 121
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 20.2 bits (40), Expect = 6.9
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 31 QSPVPTPPPDPI 42
Q PVP P P P+
Sbjct: 110 QIPVPVPVPVPV 121
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 20.2 bits (40), Expect = 6.9
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 31 QSPVPTPPPDPI 42
Q PVP P P P+
Sbjct: 343 QIPVPVPVPVPV 354
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 19.8 bits (39), Expect = 9.2
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 31 QSPVPTPPPDPI 42
Q PVP P P P+
Sbjct: 110 QIPVPVPIPVPV 121
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 19.8 bits (39), Expect = 9.2
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 28 RQFQSPVPTPPPDPI 42
R +SP TP PD I
Sbjct: 323 RHIKSPYHTPEPDCI 337
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 19.8 bits (39), Expect = 9.2
Identities = 5/16 (31%), Positives = 11/16 (68%)
Query: 14 KNKNERPNPHEEDPRQ 29
+N+ P+PH+E ++
Sbjct: 178 RNERRTPDPHDETAKK 193
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.310 0.130 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,690
Number of Sequences: 429
Number of extensions: 2296
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of query: 122
length of database: 140,377
effective HSP length: 51
effective length of query: 71
effective length of database: 118,498
effective search space: 8413358
effective search space used: 8413358
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.4 bits)
S2: 39 (19.8 bits)
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