GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004084-TA|BGIBMGA004084-PA|undefined
         (104 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    25   0.19 
AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.           23   0.58 
AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.           23   0.58 
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   3.1  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    19   9.5  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    19   9.5  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    19   9.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    19   9.5  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    19   9.5  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 25.0 bits (52), Expect = 0.19
 Identities = 15/52 (28%), Positives = 27/52 (51%)

Query: 23  SDSYNETQILSMLREQTNRGGAGEEFESLLVKMMKDAKSKLNLTLKPDTCGY 74
           +D  N   IL+++R+ T R   GE   + + +++KD++     T   D  GY
Sbjct: 650 ADRPNFVTILALVRDATARLPNGEGTRADICQLLKDSQYIREQTESDDKEGY 701


>AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 23.4 bits (48), Expect = 0.58
 Identities = 10/43 (23%), Positives = 20/43 (46%)

Query: 28  ETQILSMLREQTNRGGAGEEFESLLVKMMKDAKSKLNLTLKPD 70
           E  ++ ++     RG   EEF++L   M++  +  L     P+
Sbjct: 107 EASLIGLVERHKKRGQTKEEFQNLKEVMLEVLRQALGKQYTPE 149


>AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 23.4 bits (48), Expect = 0.58
 Identities = 10/43 (23%), Positives = 20/43 (46%)

Query: 28  ETQILSMLREQTNRGGAGEEFESLLVKMMKDAKSKLNLTLKPD 70
           E  ++ ++     RG   EEF++L   M++  +  L     P+
Sbjct: 107 EASLIGLVERHKKRGQTKEEFQNLKEVMLEVLRQALGKQYTPE 149


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
          beta-synthase protein.
          Length = 504

 Score = 21.0 bits (42), Expect = 3.1
 Identities = 8/22 (36%), Positives = 12/22 (54%)

Query: 62 KLNLTLKPDTCGYCEGDFRDVI 83
          +LN T  P TC    GD+  ++
Sbjct: 15 ELNATNSPHTCRTKNGDYTKIM 36


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 19.4 bits (38), Expect = 9.5
 Identities = 11/43 (25%), Positives = 18/43 (41%)

Query: 23  SDSYNETQILSMLREQTNRGGAGEEFESLLVKMMKDAKSKLNL 65
           +D+ N  + +  L +  N     EEF   L K +      +NL
Sbjct: 465 TDAENSRRAMENLGDGRNNKEDSEEFRQRLRKELDSKTGGVNL 507


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 19.4 bits (38), Expect = 9.5
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 40   NRGGAGEEFESLLVKMMKDAKS 61
            N+ G+G   E LL + M+D  S
Sbjct: 1091 NQVGSGPLSEPLLTQTMEDVPS 1112


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 19.4 bits (38), Expect = 9.5
 Identities = 8/14 (57%), Positives = 9/14 (64%)

Query: 71  TCGYCEGDFRDVIT 84
           TC  C+G FR  IT
Sbjct: 203 TCEGCKGFFRRSIT 216


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 19.4 bits (38), Expect = 9.5
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 40   NRGGAGEEFESLLVKMMKDAKS 61
            N+ G+G   E LL + M+D  S
Sbjct: 1087 NQVGSGPLSEPLLTQTMEDVPS 1108


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
          protein.
          Length = 588

 Score = 19.4 bits (38), Expect = 9.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)

Query: 73 GYCEGDFRDVITVYNSI 89
          GY   DF+DV  ++ +I
Sbjct: 81 GYDISDFKDVDPIFGTI 97


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.316    0.132    0.371 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,742
Number of Sequences: 429
Number of extensions: 944
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of query: 104
length of database: 140,377
effective HSP length: 49
effective length of query: 55
effective length of database: 119,356
effective search space:  6564580
effective search space used:  6564580
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.2 bits)
S2: 38 (19.4 bits)