GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004083-TA|BGIBMGA004083-PA|undefined
         (55 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.              20   2.7  
AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase pro...    19   4.8  

>U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.
          Length = 182

 Score = 19.8 bits (39), Expect = 2.7
 Identities = 6/26 (23%), Positives = 16/26 (61%)

Query: 8  SCTKFNVSRAVWPQKVCYHRPISVAI 33
          +C + +    + P++  +H+PI++ I
Sbjct: 31 NCVRVSPVITIEPRRRKFHKPITLTI 56


>AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase
          protein.
          Length = 85

 Score = 19.0 bits (37), Expect = 4.8
 Identities = 6/14 (42%), Positives = 7/14 (50%)

Query: 6  NYSCTKFNVSRAVW 19
          N  CT  N+S   W
Sbjct: 26 NNMCTSLNLSNLFW 39


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.131    0.404 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,780
Number of Sequences: 429
Number of extensions: 440
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 55
length of database: 140,377
effective HSP length: 35
effective length of query: 20
effective length of database: 125,362
effective search space:  2507240
effective search space used:  2507240
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (19.1 bits)
S2: 35 (18.2 bits)