GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004082-TA|BGIBMGA004082-PA|IPR001245|Tyrosine protein
kinase, IPR002290|Serine/threonine protein kinase, IPR000719|Protein
kinase, IPR008266|Tyrosine protein kinase, active site,
IPR001547|Glycoside hydrolase, family 5, IPR011009|Protein kinase-like
         (996 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.   147   4e-37
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    50   7e-08
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    49   2e-07
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    41   4e-05
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    41   4e-05
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                40   8e-05
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    34   0.005
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              25   4.0  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score =  147 bits (356), Expect = 4e-37
 Identities = 88/271 (32%), Positives = 142/271 (52%), Gaps = 11/271 (4%)

Query: 726 VTLTKKIGSGNYGHVFKGWMERDNQESHRKEVAIKKLTRQASERNGTLYEDFKNELEIMK 785
           +T+   IG G +G V +G ++         +VAIK L   ++++      DF  E  IM 
Sbjct: 633 ITIEAIIGGGEFGDVCRGKLKLPPDGRTEIDVAIKTLKPGSADK---ARNDFLTEASIMG 689

Query: 786 SLQHINIVEILGYAWDQGPEVLIVMEYLEEGSLNYYLKFQGEKLRISHLLKYCKDIATGM 845
             +H N++ + G      P V+I+ E++E GSL+ +L+    K ++  L+   + IA+GM
Sbjct: 690 QFEHPNVIFLQGVVTKSNP-VMIITEFMENGSLDTFLRANDGKFQVLQLVGMLRGIASGM 748

Query: 846 DHVSAKNVVHRDLATRNILVVNKYHVKISDFGLARIIPK-EENTYRLKTERLLPINWYAP 904
            +++  N VHRDLA RN+LV      KI+DFGL+R I    E  Y  +  + +P+ W AP
Sbjct: 749 QYLAEMNYVHRDLAARNVLVNAALVCKIADFGLSREIESATEGAYTTRGGK-IPVRWTAP 807

Query: 905 ESAVEPWHFSTKSDVWSYGVTAWEIFTRARQEVPKF---DVDRPRERASCFQIPEECPSE 961
           E A+    F++ SDVWS G+  WE+ +   +    +   DV +  E+      P +CP  
Sbjct: 808 E-AIAFRKFTSASDVWSMGIVCWEVMSYGERPYWNWSNQDVIKSIEKGYRLPAPMDCPEA 866

Query: 962 IFRYLMKECWALDPNLRPRFIDLIHTCKRFI 992
           I++ LM +CW  +   RP F +L  T  + I
Sbjct: 867 IYQ-LMLDCWQKERTHRPTFANLTQTLDKLI 896



 Score = 87.0 bits (206), Expect = 7e-19
 Identities = 64/223 (28%), Positives = 105/223 (47%), Gaps = 10/223 (4%)

Query: 389 DETKKLLVAFKTLQRERANDYLKDFVDLASKWACIQSSSIVRLYGV-TLSSPTAMVLEYL 447
           D   ++ VA KTL+   A+    DF+  AS     +  +++ L GV T S+P  ++ E++
Sbjct: 657 DGRTEIDVAIKTLKPGSADKARNDFLTEASIMGQFEHPNVIFLQGVVTKSNPVMIITEFM 716

Query: 448 PYGPFDDYLRENGDRITPLHLKKVAAGLARALWDLSEAGVVHGYIRCRKLL----LAVLD 503
             G  D +LR N  +   L L  +  G+A  +  L+E   VH  +  R +L    L    
Sbjct: 717 ENGSLDTFLRANDGKFQVLQLVGMLRGIASGMQYLAEMNYVHRDLAARNVLVNAALVCKI 776

Query: 504 AD-RIQVKLSGPTLRQYTQQDVHWMPVEFFADMNLA--KRSVIGDIWAFATTLWEVFSYG 560
           AD  +  ++   T   YT +    +PV + A   +A  K +   D+W+     WEV SYG
Sbjct: 777 ADFGLSREIESATEGAYTTRGGK-IPVRWTAPEAIAFRKFTSASDVWSMGIVCWEVMSYG 835

Query: 561 QLP-TETNPVLTVRSYEMGDRLLRPVRCPAEVWALVRQCWHAD 602
           + P    +    ++S E G RL  P+ CP  ++ L+  CW  +
Sbjct: 836 ERPYWNWSNQDVIKSIEKGYRLPAPMDCPEAIYQLMLDCWQKE 878


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 50.4 bits (115), Expect = 7e-08
 Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 1/72 (1%)

Query: 809 VMEYLEEGSLNYYLKFQGEKLRISHLLKYCKDIATGMDHVSAKNVVHRDLATRNILVVNK 868
           VMEY+  G L Y ++  G K +    + Y  +IA G+  +  + +V+RDL   N+L+   
Sbjct: 63  VMEYVNGGDLMYQIQQCG-KFKEPVAVFYASEIAIGLFFLHGRGIVYRDLKLDNVLLDQD 121

Query: 869 YHVKISDFGLAR 880
            H+KI+DFG+ +
Sbjct: 122 GHIKIADFGMCK 133


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 49.2 bits (112), Expect = 2e-07
 Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 5/95 (5%)

Query: 837 YCKDIATGMDHVSAKNVVHRDLATRNILVVNKYHVKISDFGLARIIPKEENTYRLKTERL 896
           Y   +    D++ ++N+++RDL   N+L+ ++ +VK+ DFG A+ +     T+   T   
Sbjct: 471 YTACVVEAFDYLHSRNIIYRDLKPENLLLDSQGYVKLVDFGFAKRLDHGRKTW---TFCG 527

Query: 897 LPINWYAPESAVEPWHFSTKSDVWSYGVTAWEIFT 931
            P  + APE  +   H    +D WS GV  +E+ T
Sbjct: 528 TP-EYVAPEVILNKGH-DISADYWSLGVLMFELLT 560


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 41.1 bits (92), Expect = 4e-05
 Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 21/152 (13%)

Query: 840 DIATGMDHVSAKNVVHRDLATRNILVVNKYHVKISDFGLARIIPKEENTYRLKTERLLPI 899
           D+  G+ ++ ++ +VHRD+  +N+L+  +   K++DFG             L +    P+
Sbjct: 705 DVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGFC-----ITEVMMLGSIVGTPV 759

Query: 900 NWYAPESAVEPWHFSTKSDVWSYGVTAWEIFTRARQEVPKFDVDRPRER-----ASCFQI 954
           +  APE  +   H+ +  DV+++G+  W +     +    F+    +E           I
Sbjct: 760 H-MAPE--LLSGHYDSSVDVYAFGILFWYLCAGHVRLPYTFEQFHNKELLWTSVKKALMI 816

Query: 955 ----PEECPS---EIFRYLMKECWALDPNLRP 979
               PE  PS   E +R LM++CW+ +P+ RP
Sbjct: 817 VGIRPERLPSFDDECWR-LMEQCWSGEPSKRP 847



 Score = 28.7 bits (61), Expect = 0.25
 Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 3/25 (12%)

Query: 582 LRPVRCPA---EVWALVRQCWHADP 603
           +RP R P+   E W L+ QCW  +P
Sbjct: 819 IRPERLPSFDDECWRLMEQCWSGEP 843


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 41.1 bits (92), Expect = 4e-05
 Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 21/152 (13%)

Query: 840 DIATGMDHVSAKNVVHRDLATRNILVVNKYHVKISDFGLARIIPKEENTYRLKTERLLPI 899
           D+  G+ ++ ++ +VHRD+  +N+L+  +   K++DFG             L +    P+
Sbjct: 743 DVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGFC-----ITEVMMLGSIVGTPV 797

Query: 900 NWYAPESAVEPWHFSTKSDVWSYGVTAWEIFTRARQEVPKFDVDRPRER-----ASCFQI 954
           +  APE  +   H+ +  DV+++G+  W +     +    F+    +E           I
Sbjct: 798 H-MAPE--LLSGHYDSSVDVYAFGILFWYLCAGHVRLPYTFEQFHNKELLWTSVKKALMI 854

Query: 955 ----PEECPS---EIFRYLMKECWALDPNLRP 979
               PE  PS   E +R LM++CW+ +P+ RP
Sbjct: 855 VGIRPERLPSFDDECWR-LMEQCWSGEPSKRP 885



 Score = 28.7 bits (61), Expect = 0.25
 Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 3/25 (12%)

Query: 582 LRPVRCPA---EVWALVRQCWHADP 603
           +RP R P+   E W L+ QCW  +P
Sbjct: 857 IRPERLPSFDDECWRLMEQCWSGEP 881


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 40.3 bits (90), Expect = 8e-05
 Identities = 37/163 (22%), Positives = 71/163 (43%), Gaps = 17/163 (10%)

Query: 774 YEDFKNELEIMKSLQHINIVEILGYAWDQGPEV-LIVMEYLE---EGSLNYYLKFQGEKL 829
           Y +  N  +    L+H NIV++L    +QG  + LI ME      +  L+  +  + E++
Sbjct: 101 YSNMLNSEKHASFLKHSNIVKVLMI--EQGASLSLITMELCGTTLQNRLDEAILIKNERI 158

Query: 830 RISHLLKYCKDIATGMDHVSAKNVVHRDLATRNILVVNKYHVKISDFGLARIIPKEENTY 889
            I       K I   +       +VH D+  +NIL+      K++DFG + +I       
Sbjct: 159 CI------LKSITCALQFCHNAGIVHADVKPKNILMSKNGQPKLTDFGSSVLIGAPN--- 209

Query: 890 RLKTERLLPINWYAPESAVEPWHFSTKSDVWSYGVTAWEIFTR 932
             + ++      Y     ++    +  +D++S G+ AW++  R
Sbjct: 210 --EIDKFYGTPGYTAPEVIKQNRPTPAADIYSLGIVAWQMLFR 250


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 34.3 bits (75), Expect = 0.005
 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 3/44 (6%)

Query: 839 KDIATGMDHVSAKNVVHRDLATRNILVVNKYH---VKISDFGLA 879
           + I   + H     VVHRDL   N+L+ +K     VK++DFGLA
Sbjct: 16  QQILESVHHCHHNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 59


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 10/43 (23%), Positives = 27/43 (62%), Gaps = 3/43 (6%)

Query: 196 CSVEELIYLTRNGDSSVEVSRRGTPVFLKFKSEDQLSSFISVC 238
           C++++  ++ ++G+ +  VSR    +FL   +E++++  I+ C
Sbjct: 65  CAMKKFSFVDKDGNFNEHVSREIAKIFL---NENEINQLITEC 104


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.136    0.418 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 298,761
Number of Sequences: 429
Number of extensions: 13243
Number of successful extensions: 47
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 26
Number of HSP's gapped (non-prelim): 12
length of query: 996
length of database: 140,377
effective HSP length: 64
effective length of query: 932
effective length of database: 112,921
effective search space: 105242372
effective search space used: 105242372
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 48 (23.4 bits)