Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA004081-TA|BGIBMGA004081-PA|IPR011701|Major facilitator
superfamily MFS_1
(289 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 26 0.45
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.2
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.2
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.2
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.2
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.2
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.2
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 4.2
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 4.2
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 21 9.6
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 25.8 bits (54), Expect = 0.45
Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 8/87 (9%)
Query: 53 YLLLIGASLNVFAYAFTNIFLRESLEGAIQGRLGTLLDWSLVKQMARECFKKRPNFGRAQ 112
Y+ +G + ++A A + F+ L LG+ LDW E F +
Sbjct: 657 YICYLGKAYLMYAIAGSQCFINIWL-------LGSRLDWEDHASSPLEPSAVPSKFCLS- 708
Query: 113 ILLLTVANSLTIFILYGSMNLEYLYTR 139
+ LLTVA SL I Y + LY R
Sbjct: 709 VTLLTVATSLVIVSRYAEKSRRMLYLR 735
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 93 LVKQMARECFKKRPNFGRAQILLLTVANSLTIFI 126
L+ MA F P+ G L +T+ SLT+F+
Sbjct: 207 LISSMALLGFTLPPDSGEKLTLGVTILLSLTVFL 240
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 93 LVKQMARECFKKRPNFGRAQILLLTVANSLTIFI 126
L+ MA F P+ G L +T+ SLT+F+
Sbjct: 207 LISSMALLGFTLPPDSGEKLTLGVTILLSLTVFL 240
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 93 LVKQMARECFKKRPNFGRAQILLLTVANSLTIFI 126
L+ MA F P+ G L +T+ SLT+F+
Sbjct: 207 LISSMALLGFTLPPDSGEKLTLGVTILLSLTVFL 240
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 93 LVKQMARECFKKRPNFGRAQILLLTVANSLTIFI 126
L+ MA F P+ G L +T+ SLT+F+
Sbjct: 207 LISSMALLGFTLPPDSGEKLTLGVTILLSLTVFL 240
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 93 LVKQMARECFKKRPNFGRAQILLLTVANSLTIFI 126
L+ MA F P+ G L +T+ SLT+F+
Sbjct: 207 LISSMALLGFTLPPDSGEKLTLGVTILLSLTVFL 240
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 93 LVKQMARECFKKRPNFGRAQILLLTVANSLTIFI 126
L+ MA F P+ G L +T+ SLT+F+
Sbjct: 207 LISSMALLGFTLPPDSGEKLTLGVTILLSLTVFL 240
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 4.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 93 LVKQMARECFKKRPNFGRAQILLLTVANSLTIFI 126
L+ MA F P+ G L +T+ SLT+F+
Sbjct: 275 LISSMALLGFTLPPDSGEKLTLGVTILLSLTVFL 308
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 4.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 93 LVKQMARECFKKRPNFGRAQILLLTVANSLTIFI 126
L+ MA F P+ G L +T+ SLT+F+
Sbjct: 275 LISSMALLGFTLPPDSGEKLTLGVTILLSLTVFL 308
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.4 bits (43), Expect = 9.6
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 93 LVKQMARECFKKRPNFGRAQILLLTVANSLTIFI 126
L+ MA F P+ G L +T+ SLT+F+
Sbjct: 244 LIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFL 277
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.328 0.140 0.412
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,389
Number of Sequences: 429
Number of extensions: 1753
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of query: 289
length of database: 140,377
effective HSP length: 57
effective length of query: 232
effective length of database: 115,924
effective search space: 26894368
effective search space used: 26894368
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 43 (21.4 bits)
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