GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004080-TA|BGIBMGA004080-PA|undefined
         (122 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   0.99 
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    20   6.9  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     20   9.2  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.0 bits (47), Expect = 0.99
 Identities = 14/62 (22%), Positives = 26/62 (41%), Gaps = 4/62 (6%)

Query: 3   NIILGAAVSNILLYRTCLHSLNHPDSVCKVFLALDKTNQTDELEK----EVQRYATVVNT 58
           ++++   V    +Y     S + P  VC  ++A+D T  T  +       + RY  V   
Sbjct: 232 DLLVAVLVMPFAVYVLVNGSWSLPGFVCDFYIAMDVTCSTSSIFNLVAISIDRYIAVTQP 291

Query: 59  VK 60
           +K
Sbjct: 292 IK 293


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 20.2 bits (40), Expect = 6.9
 Identities = 10/24 (41%), Positives = 14/24 (58%)

Query: 1   MNNIILGAAVSNILLYRTCLHSLN 24
           +N  ILGA V+N++    C  S N
Sbjct: 399 VNFRILGANVNNLIKNTRCAKSNN 422


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase
          protein.
          Length = 247

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 10/43 (23%), Positives = 20/43 (46%)

Query: 38 KTNQTDELEKEVQRYATVVNTVKSIIEAVAPAVLSLFMGVWSD 80
          KTN  D   K++++    ++++   +     A   L   VW+D
Sbjct: 2  KTNNQDTFCKKMRKATKEIHSISDSLVNAKLAFGFLDNSVWAD 44


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.136    0.404 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,047
Number of Sequences: 429
Number of extensions: 1280
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 122
length of database: 140,377
effective HSP length: 51
effective length of query: 71
effective length of database: 118,498
effective search space:  8413358
effective search space used:  8413358
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.9 bits)
S2: 39 (19.8 bits)