Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA004079-TA|BGIBMGA004079-PA|undefined
(590 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 29 0.11
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 26 0.76
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 25 1.3
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 25 2.3
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 24 4.0
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 24 4.0
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 23 5.4
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 23 5.4
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 9.4
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 9.4
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 9.4
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 9.4
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 9.4
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 9.4
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 9.4
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 9.4
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 29.1 bits (62), Expect = 0.11
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 8/106 (7%)
Query: 248 IPECSGKKSQNNVNYPKSIVRSHMNPVNNISQTTDSEHEEIFSRTVKET------VVQKQ 301
+P C GK S +SI S + +I + TD +H+ S + + +VQ
Sbjct: 363 LPNCCGKWSSQKSEPRRSIYSSLLRYPRSIFRQTD-DHQNSPSIFISDDNQKLTGIVQIS 421
Query: 302 TNRKRNLMTETVQTPNKKRCKNSPVKKIDGEIFTKVSETNSKTDDF 347
+ N +TE + NK++ +S + KI+ + + S ++ F
Sbjct: 422 NMTEYNGLTEP-KKDNKRKLSDSTMNKINNHEYKRSVSRESNSNQF 466
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 26.2 bits (55), Expect = 0.76
Identities = 13/46 (28%), Positives = 25/46 (54%)
Query: 452 TIQKEKNKIRKLVTSQSCLNTDMLGDDNNFLDLIHKIVPADKMNLT 497
T+ N+I +L + ++L +NN+++L+ DK+NLT
Sbjct: 599 TLDASHNRITELSPLSVPDSVELLFINNNYINLVRPNTFTDKVNLT 644
Score = 23.0 bits (47), Expect = 7.1
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 4/33 (12%)
Query: 375 SEINSLPVNELCDAGSPER---TQERVQDKLND 404
S + +LPVN LC + + T+ R++D +ND
Sbjct: 157 SNVQALPVNSLCSLDNLQTLNLTENRLRD-IND 188
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 25.4 bits (53), Expect = 1.3
Identities = 13/54 (24%), Positives = 22/54 (40%)
Query: 263 PKSIVRSHMNPVNNISQTTDSEHEEIFSRTVKETVVQKQTNRKRNLMTETVQTP 316
P S VR M+P+N + E + S + +T + N E+ + P
Sbjct: 584 PNSAVRKCMSPINGSGASGSGSAENLSSGSNNQTSSASRENTSNTTSMESFKPP 637
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 24.6 bits (51), Expect = 2.3
Identities = 10/46 (21%), Positives = 23/46 (50%)
Query: 335 TKVSETNSKTDDFNFAKPIFPVRKSANTLKEKVIAKSAPTSEINSL 380
T++S+ + D + F +R +++ ++ + PT E+N L
Sbjct: 88 TEISDQMLELRDLPISGKPFQIRMKHGLIRDLIVDRDVPTWEVNIL 133
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.8 bits (49), Expect = 4.0
Identities = 10/26 (38%), Positives = 19/26 (73%), Gaps = 2/26 (7%)
Query: 282 DSEHEEIFSRTVKETVVQKQTNRKRN 307
D +E++ + KE +++++TNRKRN
Sbjct: 15 DRRYEKLHNE--KEKLLEERTNRKRN 38
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.8 bits (49), Expect = 4.0
Identities = 10/26 (38%), Positives = 19/26 (73%), Gaps = 2/26 (7%)
Query: 282 DSEHEEIFSRTVKETVVQKQTNRKRN 307
D +E++ + KE +++++TNRKRN
Sbjct: 15 DRRYEKLHNE--KEKLLEERTNRKRN 38
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 23.4 bits (48), Expect = 5.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 195 KQKTFRNMFTVDPITLAANRNKSMQAPLLQKD 226
KQKT R +++V PI++A S P + D
Sbjct: 377 KQKTDRLLYSVLPISVANELRHSRPVPAKKYD 408
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 23.4 bits (48), Expect = 5.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 195 KQKTFRNMFTVDPITLAANRNKSMQAPLLQKD 226
KQKT R +++V PI++A S P + D
Sbjct: 377 KQKTDRLLYSVLPISVANELRHSRPVPAKKYD 408
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 22.6 bits (46), Expect = 9.4
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 520 VTSVISACNNESVSDTFTDEEIFLEGFPDTINSNIKSCVKSFWDTDIESDVESFMVPKKT 579
V V+S+ +SD T+ E +L G P N+ C + D+ ++ + ++T
Sbjct: 139 VDLVLSSETGGDLSDFITNGEWYLIGMPGKKNTITYQCCPEPY-VDVTFTIQ---IRRRT 194
Query: 580 TYY 582
YY
Sbjct: 195 LYY 197
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 22.6 bits (46), Expect = 9.4
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 520 VTSVISACNNESVSDTFTDEEIFLEGFPDTINSNIKSCVKSFWDTDIESDVESFMVPKKT 579
V V+S+ +SD T+ E +L G P N+ C + D+ ++ + ++T
Sbjct: 139 VDLVLSSETGGDLSDFITNGEWYLIGMPGKKNTITYQCCPEPY-VDVTFTIQ---IRRRT 194
Query: 580 TYY 582
YY
Sbjct: 195 LYY 197
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 22.6 bits (46), Expect = 9.4
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 520 VTSVISACNNESVSDTFTDEEIFLEGFPDTINSNIKSCVKSFWDTDIESDVESFMVPKKT 579
V V+S+ +SD T+ E +L G P N+ C + D+ ++ + ++T
Sbjct: 139 VDLVLSSETGGDLSDFITNGEWYLIGMPGKKNTITYQCCPEPY-VDVTFTIQ---IRRRT 194
Query: 580 TYY 582
YY
Sbjct: 195 LYY 197
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 22.6 bits (46), Expect = 9.4
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 520 VTSVISACNNESVSDTFTDEEIFLEGFPDTINSNIKSCVKSFWDTDIESDVESFMVPKKT 579
V V+S+ +SD T+ E +L G P N+ C + D+ ++ + ++T
Sbjct: 139 VDLVLSSETGGDLSDFITNGEWYLIGMPGKKNTITYQCCPEPY-VDVTFTIQ---IRRRT 194
Query: 580 TYY 582
YY
Sbjct: 195 LYY 197
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 22.6 bits (46), Expect = 9.4
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 520 VTSVISACNNESVSDTFTDEEIFLEGFPDTINSNIKSCVKSFWDTDIESDVESFMVPKKT 579
V V+S+ +SD T+ E +L G P N+ C + D+ ++ + ++T
Sbjct: 139 VDLVLSSETGGDLSDFITNGEWYLIGMPGKKNTITYQCCPEPY-VDVTFTIQ---IRRRT 194
Query: 580 TYY 582
YY
Sbjct: 195 LYY 197
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 22.6 bits (46), Expect = 9.4
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 520 VTSVISACNNESVSDTFTDEEIFLEGFPDTINSNIKSCVKSFWDTDIESDVESFMVPKKT 579
V V+S+ +SD T+ E +L G P N+ C + D+ ++ + ++T
Sbjct: 139 VDLVLSSETGGDLSDFITNGEWYLIGMPGKKNTITYQCCPEPY-VDVTFTIQ---IRRRT 194
Query: 580 TYY 582
YY
Sbjct: 195 LYY 197
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 9.4
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 520 VTSVISACNNESVSDTFTDEEIFLEGFPDTINSNIKSCVKSFWDTDIESDVESFMVPKKT 579
V V+S+ +SD T+ E +L G P N+ C + D+ ++ + ++T
Sbjct: 207 VDLVLSSETGGDLSDFITNGEWYLIGMPGKKNTITYQCCPEPY-VDVTFTIQ---IRRRT 262
Query: 580 TYY 582
YY
Sbjct: 263 LYY 265
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 9.4
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 520 VTSVISACNNESVSDTFTDEEIFLEGFPDTINSNIKSCVKSFWDTDIESDVESFMVPKKT 579
V V+S+ +SD T+ E +L G P N+ C + D+ ++ + ++T
Sbjct: 207 VDLVLSSETGGDLSDFITNGEWYLIGMPGKKNTITYQCCPEPY-VDVTFTIQ---IRRRT 262
Query: 580 TYY 582
YY
Sbjct: 263 LYY 265
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.314 0.127 0.360
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,258
Number of Sequences: 429
Number of extensions: 6560
Number of successful extensions: 19
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 11
Number of HSP's gapped (non-prelim): 17
length of query: 590
length of database: 140,377
effective HSP length: 61
effective length of query: 529
effective length of database: 114,208
effective search space: 60416032
effective search space used: 60416032
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 46 (22.6 bits)
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