GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004076-TA|BGIBMGA004076-PA|undefined
         (133 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           27   0.052
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           27   0.052
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    23   1.5  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    20   7.9  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    20   7.9  

>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 27.5 bits (58), Expect = 0.052
 Identities = 10/14 (71%), Positives = 12/14 (85%)

Query: 9  LYLVPSPPFTEKSP 22
          +YL PSPPF EK+P
Sbjct: 78 VYLEPSPPFCEKNP 91


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 27.5 bits (58), Expect = 0.052
 Identities = 10/14 (71%), Positives = 12/14 (85%)

Query: 9  LYLVPSPPFTEKSP 22
          +YL PSPPF EK+P
Sbjct: 79 VYLEPSPPFCEKNP 92


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 13/41 (31%), Positives = 17/41 (41%)

Query: 75  NTYAAISGLAGGVLSKSALAGNGYNAYVPGSGAVRIYGGDN 115
           NTY    G   G +S + L  NG    + G    R   G+N
Sbjct: 64  NTYKVAKGAFTGEISPAMLLDNGIPWVILGHSERRNIFGEN 104


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 20.2 bits (40), Expect = 7.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)

Query: 102 VPGSGAVRIYGGDN 115
           + GSGAV + GG +
Sbjct: 181 IAGSGAVHLVGGSS 194


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 20.2 bits (40), Expect = 7.9
 Identities = 11/22 (50%), Positives = 13/22 (59%)

Query: 75  NTYAAISGLAGGVLSKSALAGN 96
           NTYA IS L+G  L   + A N
Sbjct: 186 NTYAYISDLSGYALVVYSWAKN 207


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.310    0.132    0.393 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,058
Number of Sequences: 429
Number of extensions: 2026
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 133
length of database: 140,377
effective HSP length: 52
effective length of query: 81
effective length of database: 118,069
effective search space:  9563589
effective search space used:  9563589
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (20.8 bits)
S2: 40 (20.2 bits)