Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA004064-TA|BGIBMGA004064-PA|IPR004413|Glutamyl-tRNA(Gln)
amidotransferase B subunit, IPR006075|GatB N-terminal region,
IPR006107|GatB, central region, IPR003789|GatB/Yqey
(515 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 27 0.28
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 27 0.37
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 25 1.5
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 25 1.5
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 23 8.0
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 23 8.0
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 23 8.0
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 23 8.0
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 23 8.0
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 27.5 bits (58), Expect = 0.28
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 9/99 (9%)
Query: 301 EPNLPPLRVNLKSKHDTQHVISVPLIQEQIPELPESSRKNLIENYQLRPEAAIQIVNEPI 360
E N LR K + QH V LIQ++ E K +I Y+LR I+
Sbjct: 21 EDNKIDLRSRTKEER-LQHRREVWLIQQEREREHERLMKKMILEYELRRIREIE------ 73
Query: 361 LLKYFVDLAEERSQSTKIANLLINELLTVLNKNKLDISD 399
K + ++ RS ++ + N TV+ NKL+ SD
Sbjct: 74 --KLGSERSKSRSPDSRDRSSTSNTSKTVILSNKLESSD 110
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 27.1 bits (57), Expect = 0.37
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 9/99 (9%)
Query: 301 EPNLPPLRVNLKSKHDTQHVISVPLIQEQIPELPESSRKNLIENYQLRPEAAIQIVNEPI 360
E N LR K + QH V LIQ++ E K +I Y+LR I+
Sbjct: 21 EDNKIDLRSRTKEER-LQHRREVWLIQQEREREHERLMKKMILEYELRRIREIE------ 73
Query: 361 LLKYFVDLAEERSQSTKIANLLINELLTVLNKNKLDISD 399
K + ++ RS ++ + N TV+ NKL+ SD
Sbjct: 74 --KLGSERSKSRSPDSRDRSNTSNTSKTVILSNKLESSD 110
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 25.0 bits (52), Expect = 1.5
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 9/99 (9%)
Query: 301 EPNLPPLRVNLKSKHDTQHVISVPLIQEQIPELPESSRKNLIENYQLRPEAAIQIVNEPI 360
E N LR K + QH V LIQ++ E K +I Y+LR I+
Sbjct: 21 EDNKIDLRSRTKEER-LQHRREVWLIQQEREREHERLMKKMILEYELRRIREIE------ 73
Query: 361 LLKYFVDLAEERSQSTKIANLLINELLTVLNKNKLDISD 399
K + ++ RS ++ + N TV+ +KL+ SD
Sbjct: 74 --KLGSERSKSRSPDSRDRSNTSNTSKTVILSDKLESSD 110
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 25.0 bits (52), Expect = 1.5
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 9/99 (9%)
Query: 301 EPNLPPLRVNLKSKHDTQHVISVPLIQEQIPELPESSRKNLIENYQLRPEAAIQIVNEPI 360
E N LR K + QH V LIQ++ E K +I Y+LR I+
Sbjct: 21 EDNKIDLRSRTKEER-LQHRREVWLIQQEREREHERLMKKMILEYELRRIREIE------ 73
Query: 361 LLKYFVDLAEERSQSTKIANLLINELLTVLNKNKLDISD 399
K + ++ RS ++ + N TV+ +KL+ SD
Sbjct: 74 --KLGSERSKSRSPGSRDRSNTSNTSKTVILSDKLESSD 110
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 22.6 bits (46), Expect = 8.0
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 32 VHALLNTNSKLFSGAQNTFGGVVNSCVSLFDAAIPGTLP 70
VH ++ + LFSG + + GGV + AAI T P
Sbjct: 43 VHEEESSLNDLFSGPEESSGGVELGWFNDSAAAITSTSP 81
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.6 bits (46), Expect = 8.0
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 301 EPNLPPLRVNLKSKHDTQHVISVPLIQEQIPELPESSRKNLIENYQLR 348
E N LR K + QH V LIQ++ E K +I Y+LR
Sbjct: 21 EDNKIDLRSRTKEER-LQHRREVWLIQQEREREHERLMKKMILEYELR 67
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.6 bits (46), Expect = 8.0
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 301 EPNLPPLRVNLKSKHDTQHVISVPLIQEQIPELPESSRKNLIENYQLR 348
E N LR K + QH V LIQ++ E K +I Y+LR
Sbjct: 21 EDNKIDLRSRTKEER-LQHRREVWLIQQEREREHERLMKKMILEYELR 67
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.6 bits (46), Expect = 8.0
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 301 EPNLPPLRVNLKSKHDTQHVISVPLIQEQIPELPESSRKNLIENYQLR 348
E N LR K + QH V LIQ++ E K +I Y+LR
Sbjct: 21 EDNKIDLRSRTKEER-LQHRREVWLIQQEREREHERLMKKMILEYELR 67
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 22.6 bits (46), Expect = 8.0
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 8/82 (9%)
Query: 318 QHVISVPLIQEQIPELPESSRKNLIENYQLRPEAAIQIVNEPILLKYFVDLAEERSQSTK 377
QH V LIQ++ E K +I Y+LR I+ K + ++ RS ++
Sbjct: 37 QHRREVWLIQQEREREHERLMKKMILEYELRRIREIE--------KLGSERSKSRSPDSR 88
Query: 378 IANLLINELLTVLNKNKLDISD 399
+ N TV+ +KL+ SD
Sbjct: 89 DRSNTSNISKTVILSDKLESSD 110
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.318 0.134 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,452
Number of Sequences: 429
Number of extensions: 5479
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 15
Number of HSP's gapped (non-prelim): 9
length of query: 515
length of database: 140,377
effective HSP length: 61
effective length of query: 454
effective length of database: 114,208
effective search space: 51850432
effective search space used: 51850432
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 46 (22.6 bits)
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