GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004062-TA|BGIBMGA004062-PA|IPR000577|Carbohydrate
kinase, FGGY, IPR005999|Glycerol kinase
         (455 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    24   2.3  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    24   2.3  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    22   9.3  

>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 24.2 bits (50), Expect = 2.3
 Identities = 10/31 (32%), Positives = 15/31 (48%)

Query: 139 VDTAGEHFTSTAPDIWGHAIPIRSCMADQTA 169
           +D   E FT+  P+ W H + I     D+ A
Sbjct: 86  LDKLAEWFTTNEPEKWNHFVEIMIKKKDEGA 116


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 24.2 bits (50), Expect = 2.3
 Identities = 10/31 (32%), Positives = 15/31 (48%)

Query: 139 VDTAGEHFTSTAPDIWGHAIPIRSCMADQTA 169
           +D   E FT+  P+ W H + I     D+ A
Sbjct: 86  LDKLAEWFTTNEPEKWNHFVEIMIKKKDEGA 116


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 22.2 bits (45), Expect = 9.3
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 356 VEMSSLGCAHIVGLHLGIWKSKQELKSLRKVGC 388
           +E   L   H VG++ G  + K  +K L ++ C
Sbjct: 449 LEKHELANVHPVGINPGKMQLKNIIKKLLQINC 481


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.132    0.416 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,344
Number of Sequences: 429
Number of extensions: 5265
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 3
length of query: 455
length of database: 140,377
effective HSP length: 60
effective length of query: 395
effective length of database: 114,637
effective search space: 45281615
effective search space used: 45281615
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)