GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004027-TA|BGIBMGA004027-PA|undefined
         (162 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   3.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   3.5  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   6.1  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    21   8.0  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    21   8.0  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 8/25 (32%), Positives = 15/25 (60%)

Query: 21  SCTTYFNINWRARVSCTVINTNSTT 45
           S T   ++ WR +V+  ++N+ S T
Sbjct: 497 SSTHTLDVAWRRKVTIEILNSLSAT 521


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 8/25 (32%), Positives = 15/25 (60%)

Query: 21  SCTTYFNINWRARVSCTVINTNSTT 45
           S T   ++ WR +V+  ++N+ S T
Sbjct: 535 SSTHTLDVAWRRKVTIEILNSLSAT 559


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor
          protein.
          Length = 996

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 8/15 (53%), Positives = 9/15 (60%)

Query: 28 INWRARVSCTVINTN 42
          INWR+ V C V   N
Sbjct: 54 INWRSYVVCDVAYNN 68


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 9/21 (42%), Positives = 10/21 (47%)

Query: 61  VAMSLANPLPEPEPFGHGKVT 81
           V   L  PLP P P   G+ T
Sbjct: 367 VTFDLDEPLPPPPPIRGGEWT 387


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 8/35 (22%), Positives = 15/35 (42%)

Query: 19  GASCTTYFNINWRARVSCTVINTNSTTPVDMCHKI 53
           G     Y +  W    +C+ I +     +DMC ++
Sbjct: 99  GPLLAPYPDWTWAKNENCSGITSAYKIEIDMCDRL 133


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.323    0.136    0.429 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,795
Number of Sequences: 429
Number of extensions: 1834
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 162
length of database: 140,377
effective HSP length: 53
effective length of query: 109
effective length of database: 117,640
effective search space: 12822760
effective search space used: 12822760
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 41 (20.6 bits)