GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004002-TA|BGIBMGA004002-PA|undefined
         (160 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC027985-1|AAH27985.1| 1063|Homo sapiens MAST1 protein protein.        31   2.4  
AD000092-1|AAB51171.1| 1237|Homo sapiens hypothetical human seri...    31   2.4  
AB023190-1|BAA76817.1| 1583|Homo sapiens KIAA0973 protein protein.     31   2.4  

>BC027985-1|AAH27985.1| 1063|Homo sapiens MAST1 protein protein.
          Length = 1063

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)

Query: 76  TPLVQIIVNVNQPGADAAIIPQPVIVDESDEVKP 109
           TPLV I+V   +PGA  A++PQP+  D     +P
Sbjct: 924 TPLVPIVVEPARPGA-KAVVPQPLGADSKGLQEP 956


>AD000092-1|AAB51171.1| 1237|Homo sapiens hypothetical human
            serine-threonine protein kinase R31240_1 protein.
          Length = 1237

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)

Query: 76   TPLVQIIVNVNQPGADAAIIPQPVIVDESDEVKP 109
            TPLV I+V   +PGA  A++PQP+  D     +P
Sbjct: 1098 TPLVPIVVEPARPGA-KAVVPQPLGADSKGLQEP 1130


>AB023190-1|BAA76817.1| 1583|Homo sapiens KIAA0973 protein protein.
          Length = 1583

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)

Query: 76   TPLVQIIVNVNQPGADAAIIPQPVIVDESDEVKP 109
            TPLV I+V   +PGA  A++PQP+  D     +P
Sbjct: 1444 TPLVPIVVEPARPGA-KAVVPQPLGADSKGLQEP 1476


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.316    0.140    0.409 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,394,807
Number of Sequences: 224733
Number of extensions: 482840
Number of successful extensions: 294
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 294
Number of HSP's gapped (non-prelim): 3
length of query: 160
length of database: 73,234,838
effective HSP length: 84
effective length of query: 76
effective length of database: 54,357,266
effective search space: 4131152216
effective search space used: 4131152216
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 61 (28.7 bits)