GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003992-TA|BGIBMGA003992-PA|undefined
         (578 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    24   4.0  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   6.9  

>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 23.8 bits (49), Expect = 4.0
 Identities = 13/40 (32%), Positives = 22/40 (55%)

Query: 75  KIIKTVVKNDHVLAYVKLREEEEMESGTQEREVPTKITRS 114
           +I+   +KN  +L  VK+  +  + S T +R V T I +S
Sbjct: 153 QIVVFDLKNSKLLKQVKIPHDIAINSTTGKRNVVTPIVQS 192


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 23.0 bits (47), Expect = 6.9
 Identities = 10/24 (41%), Positives = 15/24 (62%)

Query: 58  ILNASAIKNNLNETGVRKIIKTVV 81
           I N    +++ N+T VRK+I  VV
Sbjct: 193 ISNIDGAEDHCNKTAVRKVISGVV 216


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.309    0.127    0.360 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,901
Number of Sequences: 429
Number of extensions: 6313
Number of successful extensions: 30
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 28
Number of HSP's gapped (non-prelim): 2
length of query: 578
length of database: 140,377
effective HSP length: 61
effective length of query: 517
effective length of database: 114,208
effective search space: 59045536
effective search space used: 59045536
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 46 (22.6 bits)