GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003991-TA|BGIBMGA003991-PA|IPR003565|Bis(5'-nucleosyl)-
tetraphosphatase, IPR000086|NUDIX hydrolase
         (140 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    27   0.075
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    24   0.53 
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    24   0.70 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   0.92 
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   2.1  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   2.8  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    22   2.8  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   2.8  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   4.9  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   4.9  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   4.9  
DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              21   6.5  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   6.5  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   6.5  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    20   8.6  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    20   8.6  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 27.1 bits (57), Expect = 0.075
 Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 5/75 (6%)

Query: 21  FLLLQTSYGEHHWTP--PKGHVDPGETDWMTALRETKEEAGLCEDHLDIYKDIN-KTLNY 77
           ++L++   G   WT    KGH D G T + TA     E          IY+D+  + L  
Sbjct: 442 YMLMEACLGGELWTVLRDKGHFDDGTTRFYTAC--VVEAFDYLHSRNIIYRDLKPENLLL 499

Query: 78  EVNGEPKTVVYWLAK 92
           +  G  K V +  AK
Sbjct: 500 DSQGYVKLVDFGFAK 514


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 24.2 bits (50), Expect = 0.53
 Identities = 10/17 (58%), Positives = 12/17 (70%)

Query: 38  GHVDPGETDWMTALRET 54
           GHVD G+T  + ALR T
Sbjct: 152 GHVDHGKTTLLDALRNT 168


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 23.8 bits (49), Expect = 0.70
 Identities = 22/94 (23%), Positives = 34/94 (36%), Gaps = 4/94 (4%)

Query: 30  EHHWTPPKGHVDPGETDWMTALRETKEEAGLCEDHLDIYKDINKTLNYEVNGEPKTVVYW 89
           EH W   K   DP E   +T L    E   L     DI    N    Y V    K ++++
Sbjct: 74  EHEWQDHKFQWDPAEYGGVTELYVPSEHIWL----PDIVLYNNADGEYGVTTMTKAILHY 129

Query: 90  LAKLKNPEQTVTLSSEHQDMKWLSLQEAQEISKY 123
             K+      +  SS   D+++    +     K+
Sbjct: 130 TGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKF 163


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 23.4 bits (48), Expect = 0.92
 Identities = 10/22 (45%), Positives = 14/22 (63%)

Query: 76  NYEVNGEPKTVVYWLAKLKNPE 97
           N +VN   K+ +  L KLK+PE
Sbjct: 729 NRQVNSAVKSTIQSLMKLKSPE 750


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 10/28 (35%), Positives = 15/28 (53%)

Query: 94  KNPEQTVTLSSEHQDMKWLSLQEAQEIS 121
           +N   +V L +    MKW  ++ A EIS
Sbjct: 198 ENKNGSVILDTARCSMKWTLIEHAFEIS 225


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 11/43 (25%), Positives = 21/43 (48%)

Query: 95  NPEQTVTLSSEHQDMKWLSLQEAQEISKYEDMRQLLAEFYEKC 137
           N E+T +  +  +D    S+ +   +S Y  ++ LL +F   C
Sbjct: 301 NVEETNSEETHQKDGSSDSVIKRTVVSSYLQLQDLLGDFEHPC 343


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 11/43 (25%), Positives = 21/43 (48%)

Query: 95  NPEQTVTLSSEHQDMKWLSLQEAQEISKYEDMRQLLAEFYEKC 137
           N E+T +  +  +D    S+ +   +S Y  ++ LL +F   C
Sbjct: 216 NVEETNSEETHQKDGSSDSVIKRTVVSSYLQLQDLLGDFEHPC 258


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 11/43 (25%), Positives = 21/43 (48%)

Query: 95  NPEQTVTLSSEHQDMKWLSLQEAQEISKYEDMRQLLAEFYEKC 137
           N E+T +  +  +D    S+ +   +S Y  ++ LL +F   C
Sbjct: 535 NVEETNSEETHQKDGSSDSVIKRTVVSSYLQLQDLLGDFEHPC 577


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 9/32 (28%), Positives = 17/32 (53%)

Query: 60  LCEDHLDIYKDINKTLNYEVNGEPKTVVYWLA 91
           LC   +D +  I K L Y V   P+ ++ +++
Sbjct: 132 LCMISVDRFCAITKPLKYGVKRTPRRMIVYVS 163


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 10/33 (30%), Positives = 16/33 (48%)

Query: 51  LRETKEEAGLCEDHLDIYKDINKTLNYEVNGEP 83
           ++E +E   LC+    I   I K +  +VN  P
Sbjct: 776 VKEDREGFYLCQASNGIGSGIGKVVQLKVNSSP 808



 Score = 21.0 bits (42), Expect = 4.9
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 67  IYKDINKTLNYEVNGEPKTVVYWL 90
           + K    TL+ EV+G+    V WL
Sbjct: 819 VKKGDTATLHCEVHGDTPVTVTWL 842


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 10/33 (30%), Positives = 16/33 (48%)

Query: 51  LRETKEEAGLCEDHLDIYKDINKTLNYEVNGEP 83
           ++E +E   LC+    I   I K +  +VN  P
Sbjct: 772 VKEDREGFYLCQASNGIGSGIGKVVQLKVNSSP 804



 Score = 21.0 bits (42), Expect = 4.9
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 67  IYKDINKTLNYEVNGEPKTVVYWL 90
           + K    TL+ EV+G+    V WL
Sbjct: 815 VKKGDTATLHCEVHGDTPVTVTWL 838


>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 6/19 (31%), Positives = 14/19 (73%)

Query: 119 EISKYEDMRQLLAEFYEKC 137
           EIS  ++ R++ +++ +KC
Sbjct: 25  EISDIDEFREMTSKYRKKC 43


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 9/23 (39%), Positives = 12/23 (52%)

Query: 53  ETKEEAGLCEDHLDIYKDINKTL 75
           E +E   LC +  + Y   NKTL
Sbjct: 648 EFQENVQLCSEISESYSSNNKTL 670


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 31  HHWTPPKGH 39
           HH  PP GH
Sbjct: 511 HHVAPPSGH 519


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 5/13 (38%), Positives = 12/13 (92%)

Query: 65  LDIYKDINKTLNY 77
           +D+ K+++KT+N+
Sbjct: 464 MDLLKELSKTINF 476


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 7/24 (29%), Positives = 17/24 (70%)

Query: 62  EDHLDIYKDINKTLNYEVNGEPKT 85
           E++ ++ +DI +TL+Y+ + +  T
Sbjct: 115 EENYNLLEDIYETLSYDCDVDVST 138


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.315    0.131    0.398 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,820
Number of Sequences: 429
Number of extensions: 1840
Number of successful extensions: 18
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of query: 140
length of database: 140,377
effective HSP length: 52
effective length of query: 88
effective length of database: 118,069
effective search space: 10390072
effective search space used: 10390072
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.1 bits)
S2: 40 (20.2 bits)