GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003976-TA|BGIBMGA003976-PA|IPR001245|Tyrosine protein
kinase, IPR000719|Protein kinase, IPR011009|Protein kinase-like,
IPR008266|Tyrosine protein kinase, active site, IPR000437|Prokaryotic
membrane lipoprotein lipid attachment site
         (478 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.   155   6e-40
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    53   6e-09
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                48   1e-07
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    46   9e-07
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    43   5e-06
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    43   5e-06
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    43   6e-06
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    25   1.1  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           25   1.1  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score =  155 bits (377), Expect = 6e-40
 Identities = 76/165 (46%), Positives = 102/165 (61%), Gaps = 3/165 (1%)

Query: 216 LDLLSFCRQIAMGMEFLAANRIVHRDLAARNVLVTEDKTLKIADFGLSRDIYE--ENQYK 273
           L L+   R IA GM++LA    VHRDLAARNVLV      KIADFGLSR+I    E  Y 
Sbjct: 735 LQLVGMLRGIASGMQYLAEMNYVHRDLAARNVLVNAALVCKIADFGLSREIESATEGAYT 794

Query: 274 QKGNGKMPVKWMALESLTRRVYTTQSDVWSFGVVIWEIVTVGGSPYPEVPAARLVRSLRS 333
            +G GK+PV+W A E++  R +T+ SDVWS G+V WE+++ G  PY       +++S+  
Sbjct: 795 TRG-GKIPVRWTAPEAIAFRKFTSASDVWSMGIVCWEVMSYGERPYWNWSNQDVIKSIEK 853

Query: 334 GYRMPKPVNCSKPLYDIMRACWNASPRDRPTFPELHQKLDDLLHS 378
           GYR+P P++C + +Y +M  CW      RPTF  L Q LD L+ S
Sbjct: 854 GYRLPAPMDCPEAIYQLMLDCWQKERTHRPTFANLTQTLDKLIRS 898



 Score = 47.6 bits (108), Expect = 2e-07
 Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 7/103 (6%)

Query: 67  EVRSDRVLLHEVIGEGAFGVVRRG--TLAPGGKS---VAVKMLKEFPSQEEVRSFRSEME 121
           E+ +  + +  +IG G FG V RG   L P G++   VA+K LK   + +    F +E  
Sbjct: 627 EIDAGYITIEAIIGGGEFGDVCRGKLKLPPDGRTEIDVAIKTLKPGSADKARNDFLTEAS 686

Query: 122 LMKSVGAHPHVVSLVGCCSGRKP-LIVAEYCSRGDLLSYLRCS 163
           +M     HP+V+ L G  +   P +I+ E+   G L ++LR +
Sbjct: 687 IMGQF-EHPNVIFLQGVVTKSNPVMIITEFMENGSLDTFLRAN 728


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 52.8 bits (121), Expect = 6e-09
 Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 8/126 (6%)

Query: 220 SFC-RQIAMGMEFLAANRIVHRDLAARNVLV---TEDKTLKIADFGLSRDIYEENQYKQK 275
           S C +QI   +     N +VHRDL   N+L+    +   +K+ADFGL+ ++  E Q    
Sbjct: 12  SHCIQQILESVHHCHHNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEAQ-AWF 70

Query: 276 GNGKMPVKWMALESLTRRVYTTQSDVWSFGVVIWEIVTVGGSPYPEVPAARLVRSLRSG- 334
           G    P  +++ E L +  Y    D+W+ GV+++ I+ VG  P+ +    RL   +++G 
Sbjct: 71  GFAGTP-GYLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKTGS 128

Query: 335 YRMPKP 340
           Y  P P
Sbjct: 129 YDYPSP 134


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 48.4 bits (110), Expect = 1e-07
 Identities = 43/173 (24%), Positives = 81/173 (46%), Gaps = 9/173 (5%)

Query: 210 ETELTPLDLLSFCRQIAMGMEFLAANRIVHRDLAARNVLVTEDKTLKIADFGLSRDIYEE 269
           E  L   + +   + I   ++F     IVH D+  +N+L++++   K+ DFG S  I   
Sbjct: 149 EAILIKNERICILKSITCALQFCHNAGIVHADVKPKNILMSKNGQPKLTDFGSSVLIGAP 208

Query: 270 NQYKQKGNGKMPVKWMALESLTRRVYTTQSDVWSFGVVIWEIVTVGGSPYPEVPAARLVR 329
           N+   K  G     + A E + +   T  +D++S G+V W+++     P+  + +  ++ 
Sbjct: 209 NEI-DKFYG--TPGYTAPEVIKQNRPTPAADIYSLGIVAWQML-FRKLPFAGLHSHTIIY 264

Query: 330 SLRSGYRMPKPVNCS---KPLY-DIMRACWNASPRDRPTFPELHQKLDDLLHS 378
               G+R P   N     K  Y  + +  W+ +  +RPT  E+  K+D L+ S
Sbjct: 265 LSAKGHR-PIDDNIDDEFKGTYKTLYKQMWSQNITERPTTNEVITKIDTLISS 316


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 45.6 bits (103), Expect = 9e-07
 Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 2/64 (3%)

Query: 202 LYELQGPCETELTPLDLLSFCRQIAMGMEFLAANRIVHRDLAARNVLVTEDKTLKIADFG 261
           +Y++Q  C     P+ +  +  +IA+G+ FL    IV+RDL   NVL+ +D  +KIADFG
Sbjct: 73  MYQIQ-QCGKFKEPVAVF-YASEIAIGLFFLHGRGIVYRDLKLDNVLLDQDGHIKIADFG 130

Query: 262 LSRD 265
           + ++
Sbjct: 131 MCKE 134


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 43.2 bits (97), Expect = 5e-06
 Identities = 44/199 (22%), Positives = 84/199 (42%), Gaps = 16/199 (8%)

Query: 213 LTPLDLLSFCRQIAMGMEFLAANRIVHRDLAARNVLVTEDKTLKIADFGLSRDIYEENQY 272
           L+ L+ +     +  G+ +L +  +VHRD+  +NVL+  +   K+ DFG     +   + 
Sbjct: 694 LSWLERIQIALDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFG-----FCITEV 748

Query: 273 KQKGNGKMPVKWMALESLTRRVYTTQSDVWSFGVVIWEIVTVG-GSPY-------PEVPA 324
              G+       MA E L+   Y +  DV++FG++ W +       PY        E+  
Sbjct: 749 MMLGSIVGTPVHMAPELLSGH-YDSSVDVYAFGILFWYLCAGHVRLPYTFEQFHNKELLW 807

Query: 325 ARLVRSLR-SGYRMPKPVNCSKPLYDIMRACWNASPRDRPTFPELHQKLDDLLHSACANE 383
             + ++L   G R  +  +     + +M  CW+  P  RP    +   L+ +   A  ++
Sbjct: 808 TSVKKALMIVGIRPERLPSFDDECWRLMEQCWSGEPSKRPLLGAIVPVLESIQQKAKRSK 867

Query: 384 YITLEVDVDEAPSTPKPQR 402
            +  EV  D+   +    R
Sbjct: 868 SLQ-EVSSDKLQESSTDSR 885


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 43.2 bits (97), Expect = 5e-06
 Identities = 44/199 (22%), Positives = 84/199 (42%), Gaps = 16/199 (8%)

Query: 213 LTPLDLLSFCRQIAMGMEFLAANRIVHRDLAARNVLVTEDKTLKIADFGLSRDIYEENQY 272
           L+ L+ +     +  G+ +L +  +VHRD+  +NVL+  +   K+ DFG     +   + 
Sbjct: 732 LSWLERIQIALDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFG-----FCITEV 786

Query: 273 KQKGNGKMPVKWMALESLTRRVYTTQSDVWSFGVVIWEIVTVG-GSPY-------PEVPA 324
              G+       MA E L+   Y +  DV++FG++ W +       PY        E+  
Sbjct: 787 MMLGSIVGTPVHMAPELLSGH-YDSSVDVYAFGILFWYLCAGHVRLPYTFEQFHNKELLW 845

Query: 325 ARLVRSLR-SGYRMPKPVNCSKPLYDIMRACWNASPRDRPTFPELHQKLDDLLHSACANE 383
             + ++L   G R  +  +     + +M  CW+  P  RP    +   L+ +   A  ++
Sbjct: 846 TSVKKALMIVGIRPERLPSFDDECWRLMEQCWSGEPSKRPLLGAIVPVLESIQQKAKRSK 905

Query: 384 YITLEVDVDEAPSTPKPQR 402
            +  EV  D+   +    R
Sbjct: 906 SLQ-EVSSDKLQESSTDSR 923


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 42.7 bits (96), Expect = 6e-06
 Identities = 24/95 (25%), Positives = 52/95 (54%), Gaps = 4/95 (4%)

Query: 225 IAMGMEFLAANRIVHRDLAARNVLVTEDKTLKIADFGLSRDIYEENQYKQKGNGKMPVKW 284
           +    ++L +  I++RDL   N+L+     +K+ DFG ++ +  ++  K       P ++
Sbjct: 475 VVEAFDYLHSRNIIYRDLKPENLLLDSQGYVKLVDFGFAKRL--DHGRKTWTFCGTP-EY 531

Query: 285 MALESLTRRVYTTQSDVWSFGVVIWEIVTVGGSPY 319
           +A E +  + +   +D WS GV+++E++T G  P+
Sbjct: 532 VAPEVILNKGHDISADYWSLGVLMFELLT-GTPPF 565


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 9/100 (9%)

Query: 117 RSEMELMKSVGAHPHVVSLVGCCSGRKPLIVAEYCSRGDLLSYLRCSWDIIVSKHTAKYY 176
           R+ +E++ S G    V  + G  S      VAE+ ++ + L  L  +WD+I     A Y+
Sbjct: 318 RTPIEIINS-GDVQDVPWVTGVTSEEGLYPVAEFIAKPEALKLLDENWDLI-----APYF 371

Query: 177 NNNMDSMDTSKLKVHKEHTKLVVNKLYELQGPCETELTPL 216
              +D   T   + H E  +L+ N  +E     ET L  L
Sbjct: 372 ---LDYNYTIPKEKHVEVARLIRNYYFESNKIDETTLKHL 408


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 9/100 (9%)

Query: 117 RSEMELMKSVGAHPHVVSLVGCCSGRKPLIVAEYCSRGDLLSYLRCSWDIIVSKHTAKYY 176
           R+ +E++ S G    V  + G  S      VAE+ ++ + L  L  +WD+I     A Y+
Sbjct: 318 RTPIEIINS-GDVQDVPWVTGVTSEEGLYPVAEFIAKPEALKLLDENWDLI-----APYF 371

Query: 177 NNNMDSMDTSKLKVHKEHTKLVVNKLYELQGPCETELTPL 216
              +D   T   + H E  +L+ N  +E     ET L  L
Sbjct: 372 ---LDYNYTIPKEKHVEVARLIRNYYFESNKIDETTLKHL 408


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.135    0.410 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,370
Number of Sequences: 429
Number of extensions: 5737
Number of successful extensions: 22
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 12
length of query: 478
length of database: 140,377
effective HSP length: 60
effective length of query: 418
effective length of database: 114,637
effective search space: 47918266
effective search space used: 47918266
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)