GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003968-TA|BGIBMGA003968-PA|IPR000326|Phosphoesterase,
PA-phosphatase related, IPR008934|Acid phosphatase/vanadium-dependent
haloperoxidase
         (220 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    23   2.3  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    23   3.0  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    23   3.0  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    23   3.0  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    23   3.0  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   3.0  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   9.1  

>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 3/26 (11%)

Query: 107 KDMRLSFPSAHASFSMYCAIFFIFYI 132
           K  R+ FP    SF ++ AI++IFY+
Sbjct: 466 KYSRIIFP---VSFMLFNAIYWIFYV 488


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 2/39 (5%)

Query: 90  LGYIQEYRCSGGDEALLKDMRLSFPSAHAS--FSMYCAI 126
           +G++   RC+GG   L   + LS  S  +S  F++ C +
Sbjct: 1   MGWVALGRCAGGGGRLSSVLSLSLTSLASSLIFTILCIL 39


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 2/39 (5%)

Query: 90  LGYIQEYRCSGGDEALLKDMRLSFPSAHAS--FSMYCAI 126
           +G++   RC+GG   L   + LS  S  +S  F++ C +
Sbjct: 1   MGWVALGRCAGGGGRLSSVLSLSLTSLASSLIFTILCIL 39


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 2/39 (5%)

Query: 90  LGYIQEYRCSGGDEALLKDMRLSFPSAHAS--FSMYCAI 126
           +G++   RC+GG   L   + LS  S  +S  F++ C +
Sbjct: 1   MGWVALGRCAGGGGRLSSVLSLSLTSLASSLIFTILCIL 39


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 2/39 (5%)

Query: 90  LGYIQEYRCSGGDEALLKDMRLSFPSAHAS--FSMYCAI 126
           +G++   RC+GG   L   + LS  S  +S  F++ C +
Sbjct: 1   MGWVALGRCAGGGGRLSSVLSLSLTSLASSLIFTILCIL 39


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 7/16 (43%), Positives = 12/16 (75%)

Query: 65  VIGRLRPHFFDVCRPI 80
           ++G+   HFFD+ RP+
Sbjct: 238 LVGKKITHFFDLVRPL 253


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 11/40 (27%), Positives = 16/40 (40%)

Query: 118 ASFSMYCAIFFIFYIQVKGKWRGSKLLRHGVQYAVVIAAW 157
           AS    CAI    YI +K   R  + +   +  A +   W
Sbjct: 111 ASILNLCAISLDRYIHIKDPLRYGRWVTRRIAVAGIAVVW 150


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.326    0.141    0.456 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,874
Number of Sequences: 429
Number of extensions: 2441
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 220
length of database: 140,377
effective HSP length: 55
effective length of query: 165
effective length of database: 116,782
effective search space: 19269030
effective search space used: 19269030
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 42 (21.0 bits)