GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003967-TA|BGIBMGA003967-PA|IPR008934|Acid
phosphatase/vanadium-dependent haloperoxidase,
IPR000326|Phosphoesterase, PA-phosphatase related
         (100 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   3.8  
AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synth...    19   8.8  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 7/19 (36%), Positives = 10/19 (52%)

Query: 76  SCRSHNHHEAELHVTNGNS 94
           S   H HH ++ H   G+S
Sbjct: 315 SYHPHQHHPSQYHPHRGSS 333


>AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synthase
           16 kDa proteolipidsubunit protein.
          Length = 156

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 7/13 (53%), Positives = 11/13 (84%)

Query: 47  WSDVLAGFSIGII 59
           +S + AGF+IGI+
Sbjct: 102 FSGLAAGFAIGIV 114


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.329    0.138    0.457 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,208
Number of Sequences: 429
Number of extensions: 1051
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 100
length of database: 140,377
effective HSP length: 49
effective length of query: 51
effective length of database: 119,356
effective search space:  6087156
effective search space used:  6087156
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.9 bits)
S2: 38 (19.4 bits)